WormBase Tree Display for Gene: WBGene00010766

WBGene00010766 SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 2
    Name: CGC_name: mrps-27 Person_evidence: WBPerson7169
            WBPerson117
      Sequence_name: K11B4.1
      Molecular_name: K11B4.1
        K11B4.1.1
        CE29597
        K11B4.1.2
      Other_name: CELE_K11B4.1 Accession_evidence: NDB BX284601
      Public_name: mrps-27
    DB_info: Database: AceView gene 1P387
        WormQTL gene WBGene00010766
        WormFlux gene WBGene00010766
        NDB locus_tag CELE_K11B4.1
        Panther gene CAEEL|WormBase=WBGene00010766|UniProtKB=G5ECC9
          family PTHR21393
        NCBI gene 173349
        RefSeq protein NM_061179.8
        TREEFAM TREEFAM_ID TF316446
        TrEMBL UniProtAcc G5ECC9
        UniProt_GCRP UniProtAcc G5ECC9
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 07 Jun 2018 14:30:09 WBPerson1983 Name_change: CGC_name: mrps-27
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrps
    Allele (48)
    RNASeq_FPKM (74)
    GO_annotation: 00011522
    Contained_in_operon: CEOP1764
    Ortholog (36)
    Structured_description: Automated_description: Predicted to be located in mitochondrion. Is an ortholog of human MRPS27 (mitochondrial ribosomal protein S27). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K11B4.1
    Corresponding_CDS_history: K11B4.1:wp57
    Corresponding_transcript: K11B4.1.1
      K11B4.1.2
    Other_sequence (22)
    Associated_feature: WBsf218829
  Experimental_info: RNAi_result: WBRNAi00073212 Inferred_automatically: RNAi_primary
      WBRNAi00073213 Inferred_automatically: RNAi_primary
      WBRNAi00073214 Inferred_automatically: RNAi_primary
      WBRNAi00033516 Inferred_automatically: RNAi_primary
      WBRNAi00084377 Inferred_automatically: RNAi_primary
      WBRNAi00071088 Inferred_automatically: RNAi_primary
      WBRNAi00071764 Inferred_automatically: RNAi_primary
      WBRNAi00050573 Inferred_automatically: RNAi_primary
      WBRNAi00095682 Inferred_automatically: RNAi_primary
      WBRNAi00008985 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019403
      Expr1034711
      Expr1154282
      Expr2005052
      Expr2023272
    Microarray_results (22)
    Expression_cluster: WBPaper00035073:mitochondria_protein
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00050015:ifg-1(RNAi)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00060278:atp-2(RNAi)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:PVR
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061527:C18E9.4-T27E9.2
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062554:MAGU-2_interacting
      WBPaper00064071:NHR-49_interacting
      WBPaper00064080:let-7_miRNA_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065373:sek-1(km4)_upregulated_cisplatin
      WBPaper00065945:epidermis-rpoa-2(-)_downregulated_protein
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4489_group_7
      WBPaper00025032:cluster_12
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00032165:differentially_expressed_with_age_medoid_7
      WBPaper00034739:N2lessDR1350
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_E
      WBPaper00037611:GLD-2-associated
      WBPaper00037611:RNP-8-associated
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00038231:Cry5B_2-fold_downregulated
      WBPaper00039866:ClassComp_daf-19_upregulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040963:TA300_down
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
      WBPaper00056330:mrps-5(RNAi)_downregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(83_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
    SAGE_tag: SAGE:taacaatacgagcggcc Strand: Antisense
      SAGE:gatgattcaacaagaag Strand: Sense
        Unambiguously_mapped
      SAGE:taacaatacg Strand: Antisense
      SAGE:gatgattcaa Strand: Sense
        Unambiguously_mapped
    Interaction (74)
  Map_info (2)
  Reference: WBPaper00029435
    WBPaper00038491
    WBPaper00064934
  Method: Gene