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WormBase Tree Display for Gene: WBGene00008292

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Name Class

WBGene00008292SMapS_parentSequenceC54C8
IdentityVersion1
NameSequence_nameC54C8.4
Molecular_nameC54C8.4
C54C8.4.1
CE08967
Other_nameCELE_C54C8.4Accession_evidenceNDBBX284601
Public_nameC54C8.4
DB_infoDatabaseAceViewgene1N43
WormQTLgeneWBGene00008292
WormFluxgeneWBGene00008292
NDBlocus_tagCELE_C54C8.4
PanthergeneCAEEL|WormBase=WBGene00008292|UniProtKB=O02232
familyPTHR31562
NCBIgene173112
RefSeqproteinNM_060758.5
TREEFAMTREEFAM_IDTF315659
TrEMBLUniProtAccO02232
UniProt_GCRPUniProtAccO02232
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (34)
RNASeq_FPKM (74)
GO_annotation00026856
00026857
Ortholog (44)
Paralog (21)
Structured_descriptionAutomated_descriptionPredicted to enable transferase activity. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC54C8.4
Corresponding_transcriptC54C8.4.1
Other_sequenceGW915815.1
GW916264.1
Associated_featureWBsf643758
WBsf1010894
WBsf218593
Experimental_infoRNAi_resultWBRNAi00001477Inferred_automaticallyRNAi_primary
WBRNAi00043121Inferred_automaticallyRNAi_primary
WBRNAi00003222Inferred_automaticallyRNAi_primary
WBRNAi00030131Inferred_automaticallyRNAi_primary
Expr_patternExpr1016780
Expr1033599
Expr1147090
Expr2001908
Expr2020132
Drives_constructWBCnstr00033077
Construct_productWBCnstr00033077
Microarray_results (16)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_embryo_enriched
WBPaper00037950:hypodermis_embryo_SelectivelyEnriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00043945:MeHg_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045017:blmp-1(tm548)_downregulated
WBPaper00045774:clk-1_downregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00048611:MnCl2_upregulated
WBPaper00049377:MWCNT_downregulated
WBPaper00049732:blmp-1(tm548)_vs_N2_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056169:rrf-3(pk1426)_upregulated_L1
WBPaper00056169:rrf-3(pk1426)_upregulated_L2
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056330:glycine_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056617:adr-1_upregulated_L4_transcript
WBPaper00056617:adr-2_upregulated_L4_transcript
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00057347:nhr-14(tm1473)_downreglated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058945:mir-1(gk276)_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059421:daf-1(m40)_downregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060084:cco-1(RNAi)_downregulated_N2
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060445:ikb-1(nr2027)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Seam_cell
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:F53B1.6_3658-ZK829.3_3484
WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
WBPaper00061653:alh-4(hj221)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062347:blmp-1(tm548)_downregulated
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065315:mating_upregulated_Day2-7
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:Cisplatin_upregulated_tetraploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4386_cluster_6_6
cgc4489_group_8
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00032948:FedUp
WBPaper00032948:MoltOssilate
WBPaper00034739:N2lessDR1350
WBPaper00034739:RIL17lessRIL14
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036286:Pattern_G
WBPaper00040185:nhr-23(RNAi)_downregulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00041207:CE_dauer_down
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045673:colistin_upregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00046548:dafachronic-acid_upregulated
WBPaper00047070:N2_starvation_downregulated
InteractionWBInteraction000306038
WBInteraction000401344
WBInteraction000438644
WBInteraction000449698
Map_infoPositivePositive_cloneC54C8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI13.2219
ReferenceWBPaper00065080
MethodGene