WormBase Tree Display for Gene: WBGene00007954

WBGene00007954 SMap: S_parent: Sequence: C35C5
  Identity: Version: 3
    Name: CGC_name: gcp-2.2 Person_evidence: WBPerson683
      Sequence_name: C35C5.2
      Molecular_name: C35C5.2
        C35C5.2.1
        CE44197
      Other_name: CELE_C35C5.2 Accession_evidence: NDB BX284606
      Public_name: gcp-2.2
    DB_info: Database: AceView gene XM157
            XM161
        WormQTL gene WBGene00007954
        WormFlux gene WBGene00007954
        NDB locus_tag CELE_C35C5.2
        Panther gene CAEEL|WormBase=WBGene00007954|UniProtKB=Q93332
          family PTHR10404
        NCBI gene 183230
        RefSeq protein NM_077527.5
        TREEFAM TREEFAM_ID TF312981
        TrEMBL UniProtAcc Q93332
        UniProt_GCRP UniProtAcc Q93332
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 28 Feb 2005 11:37:29 WBPerson1983 Event: Split_into: WBGene00044121
        3 17 Apr 2013 09:53:02 WBPerson2970 Name_change: CGC_name: gcp-2.2
      Split_into: WBGene00044121
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gcp
    Allele (53)
    RNASeq_FPKM (74)
    GO_annotation: 00085708
      00085709
    Ortholog (50)
    Paralog: WBGene00020082 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00044121 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Predicted to enable carboxypeptidase activity. Predicted to be located in membrane. Is an ortholog of human FOLH1 (folate hydrolase 1); NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2); and NAALADL1 (N-acetylated alpha-linked acidic dipeptidase like 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:7693 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3788)
      DOID:3526 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3788)
  Molecular_info: Corresponding_CDS: C35C5.2
    Corresponding_CDS_history: C35C5.2:wp140
      C35C5.2:wp208
    Corresponding_transcript: C35C5.2.1
  Experimental_info: RNAi_result: WBRNAi00095218 Inferred_automatically: RNAi_primary
      WBRNAi00089004 Inferred_automatically: RNAi_primary
      WBRNAi00041964 Inferred_automatically: RNAi_primary
      WBRNAi00011651 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024596
      Expr1145978
    Drives_construct: WBCnstr00033354
    Construct_product: WBCnstr00033354
    Microarray_results (15)
    Expression_cluster: WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_downregulated
      WBPaper00048923:Aging_regulated
      WBPaper00050231:male_enriched
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055226:adr-1(tm668)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056619:CEPsh_enriched
      WBPaper00056809:smn-1(ok355)_upregulated
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00061530:nhr-49(e2144)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00065841:5_0
      WBPaper00065841:30_0
      WBPaper00065841:30_5
      WBPaper00065841:47_0
      WBPaper00065841:141_0
    Interaction (123)
  Map_info: Map: X Position: 4.35281
    Positive: Positive_clone: C35C5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028789
    WBPaper00038491
    WBPaper00055090
    WBPaper00066339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene