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WormBase Tree Display for Gene: WBGene00007120

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Name Class

WBGene00007120SMapS_parentSequenceB0250
IdentityVersion2
NameSequence_nameB0250.3
Molecular_nameB0250.3
Other_nameCELE_B0250.3Accession_evidenceNDBBX284605
Public_nameB0250.3
DB_infoDatabaseAceViewgene5U938
NDBlocus_tagCELE_B0250.3
NCBIgene180341
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
208 Dec 2005 14:14:34WBPerson1983EventChanged_classCDSPseudogene
StatusLive
Gene_infoBiotypeSO:0000336
Allele (42)
StrainWBStrain00001508
RNASeq_FPKM (74)
ParalogWBGene00004413Caenorhabditis elegansFrom_analysismodENCODE_Pseudogenes
Structured_descriptionAutomated_descriptionEnriched in germ line and somatic gonad precursor based on RNA-seq studies. Is affected by several genes including daf-16; pgl-1; and unc-30 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS_historyB0250.3:wp152
Corresponding_pseudogeneB0250.3
Corresponding_pseudogene_historyB0250.3:wp123
Other_sequence (235)
Associated_featureWBsf020055
WBsf021004
Experimental_infoExpr_patternExpr5030
Drives_constructWBCnstr00002365
Microarray_results (11)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00045521:Gender_Neutral
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00051039:germline_enriched
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00056826:SGP_biased
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_noncoding-RNA
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_upregulated_N2
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00032165:differentially_expressed_with_age_medoid_7
WBPaper00041606:CE_S.marcescens_regulated
InteractionWBInteraction000047503
Map_infoPositivePositive_cloneB0250Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV24.9961
MethodGene