WormBase Tree Display for Gene: WBGene00006113

WBGene00006113 SMap: S_parent: Sequence: C34D4
  Identity: Version: 1
    Name: CGC_name: str-48 Person_evidence: WBPerson42
      Sequence_name: C34D4.8
      Molecular_name: C34D4.8
        C34D4.8.1
        CE24826
      Other_name: CELE_C34D4.8 Accession_evidence: NDB BX284604
      Public_name: str-48
    DB_info: Database: AceView gene 4H885
        WormQTL gene WBGene00006113
        WormFlux gene WBGene00006113
        NDB locus_tag CELE_C34D4.8
        Panther gene CAEEL|WormBase=WBGene00006113|UniProtKB=Q18441
          family PTHR46178
        NCBI gene 191980
        RefSeq protein NM_068715.2
        TrEMBL UniProtAcc Q18441
        UniProt_GCRP UniProtAcc Q18441
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:39 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: str
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00061262
    Ortholog (12)
    Paralog (270)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34D4.8
    Corresponding_transcript: C34D4.8.1
  Experimental_info: RNAi_result: WBRNAi00029524 Inferred_automatically: RNAi_primary
      WBRNAi00011603 Inferred_automatically: RNAi_primary
      WBRNAi00041878 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010509
      Expr1145894
      Expr2017069
      Expr2035207
    Drives_construct: WBCnstr00034530
    Construct_product: WBCnstr00034530
    Microarray_results (19)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044760:germline_specific
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_downregulated
      WBPaper00046805:csr-1(RNAi)_upregulated_Set1
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00058955:heatshock_upregulated_CE
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:ASJ
      WBPaper00061340:Coelomocyte
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:srj-42-srw-113
      WBPaper00062103:neuron_enriched
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00065841:99_0
      WBPaper00036123:Atrazine_regulated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00045294:50uM_DBAA_downregulated
      [cgc6390]:intrinsic
    Interaction (18)
  Map_info: Map: IV Position: 3.2898 Error: 4.8e-05
    Positive: Positive_clone: C34D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004572
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene