WormBase Tree Display for Gene: WBGene00005347

WBGene00005347 SMap: S_parent: Sequence: F14F9
  Identity: Version: 1
    Name: CGC_name: srh-130 Person_evidence: WBPerson522
      Sequence_name: F14F9.1
      Molecular_name: F14F9.1
        F14F9.1.1
        CE24900
      Other_name: CELE_F14F9.1 Accession_evidence: NDB BX284605
      Public_name: srh-130
    DB_info: Database: AceView gene 5F627
        WormQTL gene WBGene00005347
        WormFlux gene WBGene00005347
        NDB locus_tag CELE_F14F9.1
        Panther gene CAEEL|WormBase=WBGene00005347|UniProtKB=Q9GUC3
          family PTHR22941
        NCBI gene 191884
        RefSeq protein NM_071978.2
        TrEMBL UniProtAcc Q9GUC3
        UniProt_GCRP UniProtAcc Q9GUC3
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:38 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srh
    Allele (32)
    RNASeq_FPKM (74)
    GO_annotation: 00092450
    Ortholog (31)
    Paralog (297)
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in head neurons; sensory neurons; and vulval cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F14F9.1
    Corresponding_transcript: F14F9.1.1
    Associated_feature: WBsf231733
  Experimental_info: RNAi_result: WBRNAi00030959 Inferred_automatically: RNAi_primary
      WBRNAi00013306 Inferred_automatically: RNAi_primary
      WBRNAi00044636 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14074
      Expr1025382
      Expr1148607
      Expr2016374
      Expr2034594
    Drives_construct: WBCnstr00035024
    Construct_product: WBCnstr00035024
    Microarray_results (20)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044760:germline_specific
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061527:ckr-1-T09B9.3
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061902:camt-1(ok515)_regulated_AFD
      WBPaper00062103:neuron_enriched
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00065841:47_0
      WBPaper00065841:81_0
      cgc4489_group_9
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00028789:PA14_vs_gacA_upregulated_8hr
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
    Interaction (117)
  Map_info: Map: V Position: -2.46704 Error: 0.004904
    Positive: Positive_clone: F14F9 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00003921
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene