WormBase Tree Display for Gene: WBGene00005251

WBGene00005251 SMap: S_parent: Sequence: ZC404
  Identity: Version: 1
    Name: CGC_name: srh-28 Person_evidence: WBPerson522
      Sequence_name: ZC404.5
      Molecular_name: ZC404.5
        ZC404.5.1
        CE38128
      Other_name: CELE_ZC404.5 Accession_evidence: NDB BX284605
      Public_name: srh-28
    DB_info: Database: AceView gene 5H254
        WormQTL gene WBGene00005251
        WormFlux gene WBGene00005251
        NDB locus_tag CELE_ZC404.5
        Panther gene CAEEL|WormBase=WBGene00005251|UniProtKB=Q23284
          family PTHR46891
        NCBI gene 191850
        RefSeq protein NM_001380678.2
        TREEFAM TREEFAM_ID TF342964
        TrEMBL UniProtAcc Q23284
        UniProt_GCRP UniProtAcc Q23284
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:37 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: srh
    Allele (31)
    Strain: WBStrain00003736
    RNASeq_FPKM (74)
    GO_annotation: 00077923
    Ortholog (13)
    Paralog (297)
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in ASHL; ASHR; ASJL; and ASJR. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZC404.5
    Corresponding_CDS_history: ZC404.5:wp138
    Corresponding_transcript: ZC404.5.1
  Experimental_info: RNAi_result: WBRNAi00073415 Inferred_automatically: RNAi_primary
      WBRNAi00021676 Inferred_automatically: RNAi_primary
      WBRNAi00038038 Inferred_automatically: RNAi_primary
      WBRNAi00058888 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7167
      Expr14066
      Expr1024992
      Expr1162324
      Expr2016473
      Expr2034675
    Drives_construct: WBCnstr00004171
      WBCnstr00035087
    Construct_product: WBCnstr00035087
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:ASH
      WBPaper00061340:ASJ
      WBPaper00061340:AUA
      WBPaper00061340:OLL
      WBPaper00061340:Y
      WBPaper00061527:srj-21-srh-32
      WBPaper00061651:ASH_enriched
      WBPaper00061651:PHA_enriched
      WBPaper00062103:neuron_enriched
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00065623:106
      WBPaper00065841:47_0
      WBPaper00065841:47_1
      WBPaper00065841:99_0
      cgc4489_group_15
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00041939:control_vs_EtBr-exposed_48h
    Interaction (82)
  Map_info: Map: V Position: 0.149753 Error: 0.000744
    Positive: Positive_clone: ZC404 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene