WormBase Tree Display for Gene: WBGene00001947

WBGene00001947 SMap: S_parent: Sequence: W09H1
  Identity: Version: 3
    Name: CGC_name: his-73 Person_evidence: WBPerson160
      Sequence_name: W09H1.2
      Molecular_name: W09H1.2
        W09H1.2.1
        CE52774
      Other_name: CELE_W09H1.2 Accession_evidence: NDB BX284602
      Public_name: his-73
    DB_info: Database: AceView gene 2N471
        WormQTL gene WBGene00001947
        NDB locus_tag CELE_W09H1.2
        NCBI gene 41657024
        RefSeq protein NM_001381638.1
        TrEMBL UniProtAcc H2L2I6
        UniProt_GCRP UniProtAcc H2L2I6
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 07 Oct 2004 14:55:43 WBPerson1983 Event: Changed_class: CDS Pseudogene
        3 01 Oct 2012 14:47:18 WBPerson1983 Event: Changed_class: Pseudogene CDS
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: his
    Allele (87)
    RNASeq_FPKM (74)
    GO_annotation: 00109794
      00109795
      00109796
      00109797
    Ortholog: CSP26.g14774 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP39.g16733 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11823 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Pan_g20773 Panagrellus redivivus From_analysis: WormBase-Compara
      chrII_pilon.g6332 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00249454 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00300596 Trichuris muris From_analysis: WormBase-Compara
    Paralog (24)
    Structured_description: Automated_description: Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Predicted to be part of nucleosome. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W09H1.2
    Corresponding_CDS_history: W09H1.2:wp133
      W09H1.2:wp267
    Corresponding_transcript: W09H1.2.1
    Corresponding_pseudogene_history: W09H1.2:wp234
    Other_sequence: SS01643
    Associated_feature: WBsf654923
      WBsf990354
      WBsf1013584
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr2012483
      Expr2030722
    Microarray_results (11)
    Expression_cluster: WBPaper00032097:CGH-1-associated-mRNA
      WBPaper00045521:Spermatogenic
      WBPaper00045774:clk-1_downregulated
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050712:RC301_vs_DA650_4h-PA_upregulated
      WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00055013:HMG-3_interacting_protein
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00056443:DietaryRestriction_downregulated
      WBPaper00056826:SGP_biased
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:PLM_ALN_grandparent
      WBPaper00061340:RMED
      WBPaper00061479:hrde-1(tm1200)_upregulated
      WBPaper00061479:mep-1(ne4629)_upregulated
      WBPaper00061527:172183_at-176110_at
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_upregulated
      WBPaper00062159:hda-2(ok1479)_downregulated
      WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
      WBPaper00064201:SNA-1_interacting
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00066110:Cisplatin_upregulated_diploid
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_10
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00032165:differentially_expressed_with_age_medoid_7
      WBPaper00036286:Pattern_B
      WBPaper00037147:heatshock_upregulated
    Interaction: WBInteraction000558652
  Map_info: Map: II Position: 15.1815 Error: 0.140872
    Positive: Positive_clone: W09H1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4980
        5032
    Pseudo_map_position
  Reference: WBPaper00034988
    WBPaper00039576
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene