Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00001340

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00001340SMapS_parentSequenceCHROMOSOME_II
IdentityVersion1
NameCGC_nameetr-1Person_evidenceWBPerson261
Sequence_nameT01D1.2
Molecular_nameT01D1.2a
T01D1.2a.1
CE12942
T01D1.2b
CE41582
T01D1.2d
CE41583
T01D1.2e
CE41584
T01D1.2f
CE41585
T01D1.2g
CE41586
T01D1.2l
CE50637
T01D1.2m
CE50668
T01D1.2n
CE50589
T01D1.2o
CE50621
T01D1.2p
CE50615
T01D1.2q
CE28070
T01D1.2r
CE50578
T01D1.2s
CE50607
T01D1.2t
CE50645
T01D1.2u
CE50532
T01D1.2v
CE50620
T01D1.2w
CE50674
T01D1.2x
CE50653
T01D1.2a.2
T01D1.2a.3
T01D1.2a.4
T01D1.2b.1
T01D1.2c
T01D1.2d.1
T01D1.2d.2
T01D1.2e.1
T01D1.2e.2
T01D1.2e.3
T01D1.2e.4
T01D1.2f.1
T01D1.2f.2
T01D1.2f.3
T01D1.2g.1
T01D1.2g.2
T01D1.2g.3
T01D1.2l.1
T01D1.2l.2
T01D1.2m.1
T01D1.2n.1
T01D1.2o.1
T01D1.2p.1
T01D1.2q.1
T01D1.2r.1
T01D1.2s.1
T01D1.2t.1
T01D1.2u.1
T01D1.2v.1
T01D1.2w.1
T01D1.2x.1
Other_nameCELE_T01D1.2Accession_evidenceNDBBX284602
Public_nameetr-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:24WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classetr
Allele (130)
Possibly_affected_byWBVar02152955
WBVar02152954
StrainWBStrain00054854
WBStrain00054853
RNASeq_FPKM (74)
GO_annotation (13)
Ortholog (43)
Paralog (13)
Structured_description (2)
Disease_infoPotential_modelDOID:0070383Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:2550)
Molecular_infoCorresponding_CDS (19)
Corresponding_CDS_historyT01D1.2b:wp182
T01D1.2c:wp247
Corresponding_transcript (32)
Other_sequence (57)
Associated_feature (19)
Experimental_infoRNAi_result (25)
Expr_patternExpr1204
Expr9488
Expr13464
Expr1026122
Expr1030819
Expr1155747
Expr2011378
Expr2029614
Drives_constructWBCnstr00010149
WBCnstr00036992
Construct_productWBCnstr00014053
WBCnstr00036992
Regulate_expr_clusterWBPaper00062325:etr-1(lq61)_downregulated
WBPaper00062325:etr-1(lq61)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062325:muscle_depleted_noncoding-RNA
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062325:muscle_enriched_noncoding-RNA
AntibodyWBAntibody00002767
Microarray_results (74)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032031:DConiospora_upregulated_OligoArray_24h
WBPaper00035269:cde-1_regulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037055:DAF-16_binding_DNA
WBPaper00037950:AVE-neuron_embryo_enriched
WBPaper00037950:AVE-neuron_embryo_SelectivelyEnriched
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00040209:B.thuringiensis_upregulated_MY18
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Oogenic
WBPaper00045571:germline-ablation_downregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00051039:germline_enriched
WBPaper00051558:aging_regulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053599:female_vs_male_upregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056826:hmc_biased
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00059471:EGL-43_interacting
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:AVE
WBPaper00061340:Intestinal_and_rectal_muscle
WBPaper00061340:mu_int_mu_anal
WBPaper00061466:nath-10(icb99)_upregulated
WBPaper00061466:nath-10(icb102)_upregulated
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:cdc-42_17192-rab-5_18073
WBPaper00061527:cids-2_2203-attf-2_2451
WBPaper00062325:etr-1(lq61)_downregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062498:PPM-1.D_interacting
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064716:paraquat_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065841:7_4
WBPaper00065841:38_2
WBPaper00065841:102_0
WBPaper00065841:110_0
WBPaper00065841:110_1
WBPaper00065841:121_0
cgc4386_cluster_6_4
cgc4489_group_9
WBPaper00025032:cluster_110
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030985:Serratia_marcesens_downregulated
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00034739:N2lessDR1350
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00037695:WC_5-day
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00041002:HQ_3d_0.2mM_Down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00042236:flcn-1(ok975)_upregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00048989:N2_allantoin_upregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:cluster_2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(66_min)
[cgc5767]:expression_class_E_pi(83_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MDE
[cgc5767]:expression_class_MD_pd(23_min)
[cgc5767]:expression_class_ME
Interaction (42)
Map_infoMapIIPosition-15.9026Error0.013546
PositivePositive_cloneT01D1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (23)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene