WormBase Tree Display for Gene: WBGene00015477

WBGene00015477 SMap: S_parent: Sequence: C05D10
  Identity: Version: 2
    Name: CGC_name: attf-4 Person_evidence: WBPerson260
            WBPerson1997
      Sequence_name: C05D10.1
      Molecular_name: C05D10.1a
        C05D10.1a.1
        CE24783
        C05D10.1b
        CE01124
        C05D10.1c
        CE37698
        C05D10.1b.1
        C05D10.1c.1
      Other_name: CELE_C05D10.1 Accession_evidence: NDB BX284603
      Public_name: attf-4
    DB_info: Database: AceView gene 3H173
        WormQTL gene WBGene00015477
        WormFlux gene WBGene00015477
        NDB locus_tag CELE_C05D10.1
        Panther gene CAEEL|WormBase=WBGene00015477|UniProtKB=Q11178
          family PTHR36522
        NCBI gene 175858
        RefSeq protein NM_001379742.1
            NM_171147.7
            NM_001379741.2
        SwissProt UniProtAcc Q11178
        TREEFAM TREEFAM_ID TF321832
        UniProt_GCRP UniProtAcc Q11178
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Sep 2011 11:35:55 WBPerson2970 Name_change: CGC_name: attf-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: attf
    Allele (41)
    Strain: WBStrain00031990
      WBStrain00030081
      WBStrain00030082
    RNASeq_FPKM (74)
    GO_annotation: 00057328
    Ortholog (27)
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Expressed in head muscle; hypodermis; pharyngeal-intestinal valve; tail neurons; and ventral nerve cord. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05D10.1a
      C05D10.1b
      C05D10.1c
    Corresponding_CDS_history: C05D10.1b:wp275
    Corresponding_transcript: C05D10.1a.1
      C05D10.1b.1
      C05D10.1c.1
    Other_sequence (13)
    Associated_feature (14)
    Gene_product_binds: WBsf977574
      WBsf977577
      WBsf977579
      WBsf977580
      WBsf977581
      WBsf977583
      WBsf977590
      WBsf977591
      WBsf977593
      WBsf977594
      WBsf977596
      WBsf977597
      WBsf977607
      WBsf977608
      WBsf977611
      WBsf977614
      WBsf977615
      WBsf977626
      WBsf977627
      WBsf977630
      WBsf977631
      WBsf977632
      WBsf977636
      WBsf977637
      WBsf977638
      WBsf977654
      WBsf977659
      WBsf977663
      WBsf977664
      WBsf977665
      WBsf977666
      WBsf977668
      WBsf977673
      WBsf977674
      WBsf977676
      WBsf977677
      WBsf977679
      WBsf977684
      WBsf977685
      WBsf977686
      WBsf977689
      WBsf977692
      WBsf977694
      WBsf977695
      WBsf977700
      WBsf977706
      WBsf977708
      WBsf977710
      WBsf977712
      WBsf977713
      WBsf977714
      WBsf977725
      WBsf977726
      WBsf977728
      WBsf977729
      WBsf977730
      WBsf977736
      WBsf977738
      WBsf977741
      WBsf977744
      WBsf977747
      WBsf977750
      WBsf977753
      WBsf977754
      WBsf977755
      WBsf977763
      WBsf977766
      WBsf977768
      WBsf977772
      WBsf977775
      WBsf977777
      WBsf977778
      WBsf977781
      WBsf977783
      WBsf977786
      WBsf977800
      WBsf977804
      WBsf977806
      WBsf977807
      WBsf977811
      WBsf977813
      WBsf977815
      WBsf977817
      WBsf977820
      WBsf977822
      WBsf977825
      WBsf977829
      WBsf977830
      WBsf977831
      WBsf977838
      WBsf977840
      WBsf977843
      WBsf977844
      WBsf977845
      WBsf977846
      WBsf977847
      WBsf977848
      WBsf977849
      WBsf977853
      WBsf977855
      WBsf977856
      WBsf977857
      WBsf977860
      WBsf977862
      WBsf977864
      WBsf977869
      WBsf977878
      WBsf977880
      WBsf977881
      WBsf977882
      WBsf977883
      WBsf977884
      WBsf977885
      WBsf977886
      WBsf977887
      WBsf977888
      WBsf977890
      WBsf977893
      WBsf977896
      WBsf977897
      WBsf977898
      WBsf977899
      WBsf977900
      WBsf977904
      WBsf977905
      WBsf977907
      WBsf977908
      WBsf977911
      WBsf977912
      WBsf977913
      WBsf977914
      WBsf977917
      WBsf977918
      WBsf977919
      WBsf977920
      WBsf977921
      WBsf977922
      WBsf977923
      WBsf977926
      WBsf977928
      WBsf977930
      WBsf977931
      WBsf977932
      WBsf977935
      WBsf977939
      WBsf977940
      WBsf977943
      WBsf977944
      WBsf977945
      WBsf977946
      WBsf977948
    Transcription_factor: WBTranscriptionFactor000952
  Experimental_info: RNAi_result: WBRNAi00039719 Inferred_automatically: RNAi_primary
      WBRNAi00010192 Inferred_automatically: RNAi_primary
      WBRNAi00028487 Inferred_automatically: RNAi_primary
      WBRNAi00005561 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9741
      Expr9744
      Expr10218
      Expr10219
      Expr1026965
      Expr1036617
      Expr1143817
      Expr1200070
      Expr1200071
      Expr1200072
      Expr2009517
      Expr2027754
    Drives_construct: WBCnstr00014261
      WBCnstr00014264
      WBCnstr00015188
      WBCnstr00028816
    Construct_product: WBCnstr00016574
      WBCnstr00016714
      WBCnstr00028816
    Microarray_results (29)
    Expression_cluster (122)
    Interaction (28)
  Map_info: Map: III Position: -1.42234 Error: 0.000479
    Positive: Positive_clone: C05D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene