WormBase Tree Display for Gene: WBGene00003652
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WBGene00003652 | Evidence | Paper_evidence | WBPaper00003416 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_I | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nhr | ||||||
Allele (67) | |||||||
Strain | WBStrain00035350 | ||||||
WBStrain00035351 | |||||||
WBStrain00035352 | |||||||
WBStrain00036320 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Ortholog (31) | |||||||
Paralog (217) | |||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in several structures, including excretory cell; intestine; neurons; spermatheca; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y67A6A.2a | |||||
Y67A6A.2b | |||||||
Y67A6A.2c | |||||||
Y67A6A.2d | |||||||
Corresponding_CDS_history | Y67A6A.2:wp47 | ||||||
Corresponding_transcript | Y67A6A.2a.1 | ||||||
Y67A6A.2b.1 | |||||||
Y67A6A.2c.1 | |||||||
Y67A6A.2d.1 | |||||||
Other_sequence (20) | |||||||
Associated_feature (11) | |||||||
Transcription_factor | WBTranscriptionFactor000667 | ||||||
Experimental_info | RNAi_result | WBRNAi00115756 | Inferred_automatically | RNAi_primary | |||
WBRNAi00037723 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004776 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003972 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070622 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057976 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070623 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (12) | |||||||
Drives_construct | WBCnstr00001160 | ||||||
WBCnstr00001161 | |||||||
WBCnstr00001162 | |||||||
WBCnstr00012882 | |||||||
WBCnstr00017066 | |||||||
WBCnstr00018060 | |||||||
WBCnstr00018271 | |||||||
WBCnstr00018272 | |||||||
WBCnstr00035969 | |||||||
Construct_product | WBCnstr00017066 | ||||||
WBCnstr00018060 | |||||||
WBCnstr00018272 | |||||||
WBCnstr00035969 | |||||||
Regulate_expr_cluster | WBPaper00044037:eat-2_regulated_nhr-62_dependent | ||||||
Microarray_results (22) | |||||||
Expression_cluster (208) | |||||||
Interaction (20) | |||||||
Map_info | Map | I | Position | 3.91416 | Error | 0.00372 | |
Positive | Positive_clone | K10C3 | |||||
Y67A6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5233 | |||||
4721 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00027309 | ||||||
WBPaper00044037 | |||||||
WBPaper00053206 | |||||||
WBPaper00053706 | |||||||
WBPaper00062388 | |||||||
WBPaper00062515 | |||||||
WBPaper00064543 | |||||||
Remark | K10C3.1 has been fused into Y67A6A.2 [sdm 05/00] | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |