WormBase Tree Display for Gene: WBGene00001461
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| WBGene00001461 | Evidence | Paper_evidence | WBPaper00003915 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_X | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | flp-18 | Person_evidence | WBPerson369 | |||||
| Sequence_name | Y48D7A.2 | ||||||||
| Molecular_name | Y48D7A.2 | ||||||||
| Y48D7A.2.1 | |||||||||
| CE33736 | |||||||||
| Y48D7A.2.2 | |||||||||
| Other_name | CELE_Y48D7A.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | flp-18 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00001461 | |||||
| WormFlux | gene | WBGene00001461 | |||||||
| NDB | locus_tag | CELE_Y48D7A.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001461|UniProtKB=Q9N4V0 | |||||||
| family | PTHR20986 | ||||||||
| NCBI | gene | 180587 | |||||||
| RefSeq | protein | NM_076113.9 | |||||||
| SwissProt | UniProtAcc | Q9N4V0 | |||||||
| TREEFAM | TREEFAM_ID | TF316891 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4V0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flp | ||||||||
| Allele (105) | |||||||||
| Strain | WBStrain00037034 | ||||||||
| WBStrain00000308 | |||||||||
| WBStrain00000326 | |||||||||
| WBStrain00055083 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (13) | |||||||||
| Paralog (3) | |||||||||
| Structured_description | Concise_description | flp-18 encodes the only FMRFamide-related neuropeptide (FaRP) encoded by the C. elegans genome, other than flp-21, that activates the solitary (215V) form of NPR-1 in Xenopus oocytes; in addition, FLP-18 can activated the social (215F) form of NPR-1 in pharyngeal assays; FLP-18 is expressed in the interneurons AVA, AIY and RIG, the motor neuron RIM and the pharyngeal neurons M2 and M3. | Paper_evidence | WBPaper00004860 | |||||
| WBPaper00006174 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable neuropeptide Y receptor binding activity. Involved in neuropeptide signaling pathway; regulation of muscle contraction; and sleep. Predicted to be located in extracellular space. Expressed in coelomocyte; head; neurons; tail; and in male. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48D7A.2 | |||||||
| Corresponding_CDS_history | Y48D7A.2a:wp142 | ||||||||
| Y48D7A.2b:wp142 | |||||||||
| Corresponding_transcript | Y48D7A.2.1 | ||||||||
| Y48D7A.2.2 | |||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf653798 | ||||||||
| WBsf670006 | |||||||||
| WBsf1004503 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002229 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056908 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020750 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (15) | |||||||||
| Drives_construct | WBCnstr00001366 | ||||||||
| WBCnstr00002487 | |||||||||
| WBCnstr00008626 | |||||||||
| WBCnstr00008627 | |||||||||
| WBCnstr00009077 | |||||||||
| WBCnstr00010918 | |||||||||
| WBCnstr00011077 | |||||||||
| WBCnstr00014602 | |||||||||
| WBCnstr00014937 | |||||||||
| WBCnstr00015071 | |||||||||
| WBCnstr00015137 | |||||||||
| WBCnstr00016920 | |||||||||
| WBCnstr00017385 | |||||||||
| WBCnstr00017386 | |||||||||
| WBCnstr00017387 | |||||||||
| WBCnstr00017854 | |||||||||
| WBCnstr00018388 | |||||||||
| WBCnstr00018389 | |||||||||
| WBCnstr00018404 | |||||||||
| WBCnstr00018405 | |||||||||
| WBCnstr00018406 | |||||||||
| WBCnstr00018407 | |||||||||
| WBCnstr00018408 | |||||||||
| WBCnstr00018409 | |||||||||
| WBCnstr00018410 | |||||||||
| WBCnstr00018411 | |||||||||
| WBCnstr00018412 | |||||||||
| WBCnstr00018414 | |||||||||
| WBCnstr00018415 | |||||||||
| WBCnstr00018416 | |||||||||
| WBCnstr00018418 | |||||||||
| WBCnstr00018424 | |||||||||
| WBCnstr00018425 | |||||||||
| WBCnstr00018426 | |||||||||
| WBCnstr00018427 | |||||||||
| WBCnstr00018428 | |||||||||
| WBCnstr00018429 | |||||||||
| WBCnstr00020619 | |||||||||
| WBCnstr00023033 | |||||||||
| WBCnstr00023035 | |||||||||
| WBCnstr00042065 | |||||||||
| WBCnstr00042621 | |||||||||
| WBCnstr00042762 | |||||||||
| Construct_product | WBCnstr00017854 | ||||||||
| WBCnstr00020231 | |||||||||
| WBCnstr00042762 | |||||||||
| Antibody | WBAntibody00000611 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (221) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | X | Position | -12.6545 | Error | 0.000874 | |||
| Positive | Positive_clone | Y48D7A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (52) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
