WormBase Tree Display for Gene: WBGene00020358
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WBGene00020358 | SMap | S_parent | Sequence | T08E11 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | math-39 | Person_evidence | WBPerson655 | |||
Sequence_name | T08E11.2 | ||||||
Molecular_name | T08E11.2 | ||||||
T08E11.2.1 | |||||||
CE19569 | |||||||
Other_name | CELE_T08E11.2 | Accession_evidence | NDB | BX284602 | |||
Public_name | math-39 | ||||||
DB_info | Database | AceView | gene | 2C117 | |||
WormQTL | gene | WBGene00020358 | |||||
SignaLink | protein | WBGene00020358 | |||||
WormFlux | gene | WBGene00020358 | |||||
NDB | locus_tag | CELE_T08E11.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00020358|UniProtKB=O76642 | |||||
family | PTHR46308 | ||||||
NCBI | gene | 173552 | |||||
RefSeq | protein | NM_061687.6 | |||||
TREEFAM | TREEFAM_ID | TF322050 | |||||
TrEMBL | UniProtAcc | O76642 | |||||
UniProt_GCRP | UniProtAcc | O76642 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | math | ||||||
Allele (69) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (18) | |||||||
Paralog (85) | |||||||
Structured_description | Automated_description | Enriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T08E11.2 | |||||
Corresponding_transcript | T08E11.2.1 | ||||||
Associated_feature | WBsf220883 | ||||||
Experimental_info (7) | |||||||
Map_info | Map | II | Position | -14.3205 | Error | 0.003924 | |
Positive | Positive_clone | T08E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00062345 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |