WormBase Tree Display for Gene: WBGene00019711
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WBGene00019711 | SMap | S_parent | Sequence | M01E11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ctnb-1 | |||||||
Sequence_name | M01E11.2 | ||||||||
Molecular_name | M01E11.2 | ||||||||
M01E11.2.1 | |||||||||
CE12290 | |||||||||
Other_name | CELE_M01E11.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | ctnb-1 | ||||||||
DB_info | Database | AceView | gene | 1G149 | |||||
WormQTL | gene | WBGene00019711 | |||||||
WormFlux | gene | WBGene00019711 | |||||||
NDB | locus_tag | CELE_M01E11.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019711|UniProtKB=P91401 | |||||||
family | PTHR14978 | ||||||||
NCBI | gene | 172214 | |||||||
RefSeq | protein | NM_059233.6 | |||||||
TREEFAM | TREEFAM_ID | TF314294 | |||||||
TrEMBL | UniProtAcc | P91401 | |||||||
UniProt_GCRP | UniProtAcc | P91401 | |||||||
OMIM | gene | 611537 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 17 Mar 2020 17:43:06 | WBPerson1983 | Name_change | CGC_name | ctnb-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ctnb | ||||||||
Allele (26) | |||||||||
Strain | WBStrain00035252 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00050880 | ||||||||
00050881 | |||||||||
00050882 | |||||||||
Contained_in_operon | CEOP1260 | ||||||||
Ortholog (34) | |||||||||
Structured_description | Automated_description | Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Expressed in head muscle; intestine; nerve ring; pharynx; and ventral nerve cord. Human ortholog(s) of this gene implicated in colorectal cancer; morbid obesity; and primary immunodeficiency disease. Is an ortholog of human CTNNBL1 (catenin beta like 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9256 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15879) | ||||
DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15879) | ||||||
DOID:11981 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15879) | ||||||
Molecular_info | Corresponding_CDS | M01E11.2 | |||||||
Corresponding_transcript | M01E11.2.1 | ||||||||
Other_sequence (54) | |||||||||
Associated_feature | WBsf643300 | ||||||||
WBsf217680 | |||||||||
WBsf217681 | |||||||||
WBsf217682 | |||||||||
Experimental_info | RNAi_result | WBRNAi00050753 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062318 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034352 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004005 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00117082 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1540 | ||||||||
Expr7619 | |||||||||
Expr1023093 | |||||||||
Expr1038516 | |||||||||
Expr1154450 | |||||||||
Expr2005124 | |||||||||
Expr2023345 | |||||||||
Drives_construct | WBCnstr00001069 | ||||||||
WBCnstr00012764 | |||||||||
WBCnstr00025655 | |||||||||
Construct_product | WBCnstr00025655 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (75) | |||||||||
Interaction (35) | |||||||||
Map_info | Map | I | Position | 0.222598 | |||||
Positive | Positive_clone | M01E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00032961 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00064339 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |