WormBase Tree Display for Gene: WBGene00017120
expand all nodes | collapse all nodes | view schema
WBGene00017120 | SMap | S_parent | Sequence | E04A4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tctn-1 | Person_evidence | WBPerson1657 | |||||
WBPerson14462 | |||||||||
WBPerson14460 | |||||||||
Sequence_name | E04A4.6 | ||||||||
Molecular_name | E04A4.6 | ||||||||
E04A4.6.1 | |||||||||
CE46218 | |||||||||
Other_name | CELE_E04A4.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | tctn-1 | ||||||||
DB_info | Database | AceView | gene | 4F510 | |||||
WormQTL | gene | WBGene00017120 | |||||||
WormFlux | gene | WBGene00017120 | |||||||
NDB | locus_tag | CELE_E04A4.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017120|UniProtKB=O44478 | |||||||
family | PTHR14611 | ||||||||
NCBI | gene | 184035 | |||||||
RefSeq | protein | NM_068227.4 | |||||||
TREEFAM | TREEFAM_ID | TF316522 | |||||||
TrEMBL | UniProtAcc | O44478 | |||||||
UniProt_GCRP | UniProtAcc | O44478 | |||||||
OMIM | gene | 609863 | |||||||
613847 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 08 Dec 2011 14:44:24 | WBPerson2970 | Name_change | CGC_name | tctn-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tctn | ||||||||
Allele (18) | |||||||||
Strain | WBStrain00032915 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00032516 | ||||||||
00032517 | |||||||||
00032518 | |||||||||
00032519 | |||||||||
Contained_in_operon | CEOP4148 | ||||||||
Ortholog (24) | |||||||||
Structured_description | Automated_description | Predicted to be involved in cilium assembly. Predicted to be located in ciliary transition zone. Human ortholog(s) of this gene implicated in Joubert syndrome 13; Joubert syndrome 18; and orofaciodigital syndrome IV. Is an ortholog of human TCTN1 (tectonic family member 1) and TCTN3 (tectonic family member 3). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0110987 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24519) | ||||
DOID:0110982 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26113) | ||||||
DOID:0060374 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24519) | ||||||
Molecular_info | Corresponding_CDS | E04A4.6 | |||||||
Corresponding_CDS_history | E04A4.6:wp227 | ||||||||
Corresponding_transcript | E04A4.6.1 | ||||||||
Other_sequence | ACC09020_1 | ||||||||
EY461619.1 | |||||||||
Associated_feature | WBsf651774 | ||||||||
WBsf667904 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012682 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043666 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr12582 | ||||||||
Expr1013020 | |||||||||
Expr1037353 | |||||||||
Expr1147650 | |||||||||
Expr2017365 | |||||||||
Expr2035502 | |||||||||
Construct_product | WBCnstr00022310 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (130) | |||||||||
Interaction | WBInteraction000317863 | ||||||||
WBInteraction000390963 | |||||||||
Map_info (3) | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00048761 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |