WormBase Tree Display for Gene: WBGene00016019
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WBGene00016019 | SMap | S_parent | Sequence | C23H3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ascc-1 | |||||||
Sequence_name | C23H3.3 | ||||||||
Molecular_name | C23H3.3b | ||||||||
C23H3.3a | |||||||||
CE41870 | |||||||||
C23H3.3b.1 | |||||||||
Other_name | CELE_C23H3.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | ascc-1 | ||||||||
DB_info | Database | AceView | gene | 2A349 | |||||
WormQTL | gene | WBGene00016019 | |||||||
WormFlux | gene | WBGene00016019 | |||||||
NDB | locus_tag | CELE_C23H3.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00016019|UniProtKB=A9Z1L6 | |||||||
family | PTHR13360 | ||||||||
NCBI | gene | 182817 | |||||||
RefSeq | protein | NM_001129119.3 | |||||||
NR_132568.1 | |||||||||
TREEFAM | TREEFAM_ID | TF314479 | |||||||
TrEMBL | UniProtAcc | A9Z1L6 | |||||||
UniProt_GCRP | UniProtAcc | A9Z1L6 | |||||||
OMIM | gene | 614215 | |||||||
RNAcentral | URSid | URS00008402AF | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 13 Nov 2017 15:54:28 | WBPerson1983 | Name_change | CGC_name | ascc-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ascc | ||||||||
Allele (52) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00005547 | ||||||||
00005548 | |||||||||
00121708 | |||||||||
00121709 | |||||||||
00121710 | |||||||||
Contained_in_operon | CEOP2004 | ||||||||
Ortholog (32) | |||||||||
Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in Barrett's esophagus. Is an ortholog of human ASCC1 (activating signal cointegrator 1 complex subunit 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9206 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24268) | ||||
EFO:MONDO:0000209 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24268) | ||||||
Molecular_info | Corresponding_CDS | C23H3.3b | |||||||
Corresponding_CDS_history (2) | |||||||||
Corresponding_transcript | C23H3.3a | ||||||||
C23H3.3b.1 | |||||||||
Other_sequence | CBC02716_1 | ||||||||
CJC00705_1 | |||||||||
Associated_feature | WBsf220713 | ||||||||
WBsf220714 | |||||||||
Experimental_info | RNAi_result | WBRNAi00029115 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00082514 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041021 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00077482 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011055 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00082574 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00081651 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017465 | ||||||||
Expr1036843 | |||||||||
Expr1145060 | |||||||||
Expr2001015 | |||||||||
Expr2019233 | |||||||||
Microarray_results (23) | |||||||||
Expression_cluster (102) | |||||||||
Interaction (22) | |||||||||
Map_info | Positive | Positive_clone | C23H3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -17.4519 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |