WormBase Tree Display for Gene: WBGene00015349
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WBGene00015349 | SMap | S_parent | Sequence | C02F5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | henn-1 | Paper_evidence | WBPaper00041023 | |||
WBPaper00041020 | |||||||
Person_evidence | WBPerson1159 | ||||||
Sequence_name | C02F5.6 | ||||||
Molecular_name | C02F5.6b | ||||||
C02F5.6a | |||||||
CE51509 | |||||||
C02F5.6b.1 | |||||||
Other_name | CELE_C02F5.6 | Accession_evidence | NDB | BX284603 | |||
Public_name | henn-1 | ||||||
DB_info | Database | AceView | gene | 3J321 | |||
WormQTL | gene | WBGene00015349 | |||||
WormFlux | gene | WBGene00015349 | |||||
NDB | locus_tag | CELE_C02F5.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00015349|UniProtKB=P34283 | |||||
family | PTHR21404 | ||||||
NCBI | gene | 176159 | |||||
RefSeq | protein | NR_136348.1 | |||||
NM_001322688.3 | |||||||
KEGG | KEGG_id | 2.1.1.386 | |||||
NemaPath | KEGG_id | 2.1.1.386 | |||||
SwissProt | UniProtAcc | P34283 | |||||
TREEFAM | TREEFAM_ID | TF315178 | |||||
UniProt_GCRP | UniProtAcc | P34283 | |||||
RNAcentral | URSid | URS0000A118F6 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | henn | ||||||
Allele (24) | |||||||
Strain | WBStrain00026603 | ||||||
WBStrain00026613 | |||||||
WBStrain00026606 | |||||||
WBStrain00026604 | |||||||
WBStrain00026614 | |||||||
WBStrain00026611 | |||||||
WBStrain00026605 | |||||||
WBStrain00026601 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (35) | |||||||
Contained_in_operon | CEOP3488 | ||||||
Ortholog (25) | |||||||
Structured_description | Automated_description | Enables small RNA 2'-O-methyltransferase activity. Involved in RNA methylation; piRNA processing; and siRNA processing. Located in nucleoplasm and perinuclear region of cytoplasm. Expressed in germ line and somatic cell. Is an ortholog of human HENMT1 (HEN methyltransferase 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C02F5.6b | |||||
Corresponding_CDS_history | C02F5.6a:wp252 | ||||||
C02F5.6b:wp252 | |||||||
Corresponding_transcript | C02F5.6a | ||||||
C02F5.6b.1 | |||||||
Other_sequence | Dviv_isotig16619 | ||||||
TM01003 | |||||||
CBC12816_1 | |||||||
Tcol_isotig15445 | |||||||
TMC00300_1 | |||||||
Associated_feature | WBsf645398 | ||||||
Experimental_info | RNAi_result | WBRNAi00039457 | Inferred_automatically | RNAi_primary | |||
WBRNAi00005875 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039456 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028360 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr10044 | ||||||
Expr10533 | |||||||
Expr1018239 | |||||||
Expr1036575 | |||||||
Expr1143566 | |||||||
Expr2012398 | |||||||
Expr2030634 | |||||||
Drives_construct | WBCnstr00015520 | ||||||
WBCnstr00028912 | |||||||
Construct_product | WBCnstr00014579 | ||||||
WBCnstr00014580 | |||||||
WBCnstr00015520 | |||||||
WBCnstr00028912 | |||||||
Regulate_expr_cluster | WBPaper00058942:henn-1(pk2295)_downregulated | ||||||
WBPaper00058942:henn-1(pk2295)_upregulated | |||||||
Antibody | WBAntibody00002334 | ||||||
WBAntibody00002377 | |||||||
Microarray_results (30) | |||||||
Expression_cluster (80) | |||||||
Interaction | WBInteraction000518834 | ||||||
WBInteraction000563929 | |||||||
WBInteraction000573806 | |||||||
WBInteraction000574378 | |||||||
Map_info | Map | III | Position | -0.356135 | |||
Positive | Positive_clone | C02F5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (14) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |