WormBase Tree Display for Gene: WBGene00013805
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WBGene00013805 | SMap | S_parent | Sequence | Y116A8C | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | bca-2 | Paper_evidence | WBPaper00035283 | |||||
Person_evidence | WBPerson10488 | ||||||||
Sequence_name | Y116A8C.28 | ||||||||
Molecular_name (15) | |||||||||
Other_name | CELE_Y116A8C.28 | Accession_evidence | NDB | BX284604 | |||||
Public_name | bca-2 | ||||||||
DB_info | Database | AceView | gene | 4S40 | |||||
WormQTL | gene | WBGene00013805 | |||||||
WormFlux | gene | WBGene00013805 | |||||||
NDB | locus_tag | CELE_Y116A8C.28 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013805|UniProtKB=D3NQA9 | |||||||
family | PTHR11002 | ||||||||
NCBI | gene | 178484 | |||||||
RefSeq | protein | NM_001383263.2 | |||||||
NM_001268993.5 | |||||||||
NM_001268994.3 | |||||||||
NM_001392454.1 | |||||||||
NM_001313046.3 | |||||||||
KEGG | KEGG_id | 4.2.1.1 | |||||||
NemaPath | KEGG_id | 4.2.1.1 | |||||||
TREEFAM | TREEFAM_ID | TF313025 | |||||||
TrEMBL | UniProtAcc | Q2YS41 | |||||||
D3NQB0 | |||||||||
Q8I102 | |||||||||
A0A0K3ARK9 | |||||||||
D3NQA9 | |||||||||
UniProt_GCRP | UniProtAcc | D3NQA9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 19 Oct 2009 17:02:44 | WBPerson9133 | Name_change | CGC_name | bca-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | bca | ||||||||
Allele (131) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00000818 | ||||||||
00000819 | |||||||||
00000820 | |||||||||
00000821 | |||||||||
00000822 | |||||||||
00007385 | |||||||||
00007386 | |||||||||
00120581 | |||||||||
00120582 | |||||||||
Contained_in_operon | CEOP4596 | ||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00000245 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enables carbonate dehydratase activity. Involved in one-carbon metabolic process. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y116A8C.28b | |||||||
Y116A8C.28c | |||||||||
Y116A8C.28d | |||||||||
Y116A8C.28e | |||||||||
Y116A8C.28f | |||||||||
Corresponding_CDS_history | Y116A8C.28:wp88 | ||||||||
Y116A8C.28a:wp189 | |||||||||
Y116A8C.28b:wp247 | |||||||||
Corresponding_transcript (5) | |||||||||
Other_sequence (35) | |||||||||
Associated_feature | WBsf652413 | ||||||||
WBsf668581 | |||||||||
WBsf998966 | |||||||||
WBsf015185 | |||||||||
WBsf019596 | |||||||||
Experimental_info | RNAi_result | WBRNAi00082030 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00055445 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr15877 | ||||||||
Expr1020104 | |||||||||
Expr1036180 | |||||||||
Expr1158957 | |||||||||
Expr2009577 | |||||||||
Expr2027814 | |||||||||
Microarray_results (34) | |||||||||
Expression_cluster (75) | |||||||||
Interaction | WBInteraction000187448 | ||||||||
WBInteraction000193397 | |||||||||
WBInteraction000240704 | |||||||||
WBInteraction000321335 | |||||||||
WBInteraction000322315 | |||||||||
WBInteraction000551751 | |||||||||
Map_info | Map | IV | Position | 16.1429 | Error | 0.005535 | |||
Positive | Positive_clone | Y116A8C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00035283 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |