WormBase Tree Display for Gene: WBGene00011181
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WBGene00011181 | SMap | S_parent | Sequence | R09H10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R09H10.3 | |||||||
Molecular_name | R09H10.3a | ||||||||
R09H10.3a.1 | |||||||||
CE34083 | |||||||||
R09H10.3b | |||||||||
CE12662 | |||||||||
R09H10.3b.1 | |||||||||
Other_name | CELE_R09H10.3 | Accession_evidence | NDB | BX284604 | |||||
Public_name | R09H10.3 | ||||||||
DB_info | Database | AceView | gene | 4L369 | |||||
WormQTL | gene | WBGene00011181 | |||||||
WormFlux | gene | WBGene00011181 | |||||||
NDB | locus_tag | CELE_R09H10.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011181|UniProtKB=Q21882 | |||||||
family | PTHR10395 | ||||||||
NCBI | gene | 187757 | |||||||
RefSeq | protein | NM_001047516.5 | |||||||
NM_001047515.6 | |||||||||
KEGG | KEGG_id | 3.5.2.17 | |||||||
NemaPath | KEGG_id | 3.5.2.17 | |||||||
SwissProt | UniProtAcc | Q21882 | |||||||
TREEFAM | TREEFAM_ID | TF300210 | |||||||
UniProt_GCRP | UniProtAcc | Q21882 | |||||||
OMIM | gene | 176300 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00073201 | ||||||||
00073202 | |||||||||
00073203 | |||||||||
00073204 | |||||||||
00073205 | |||||||||
00073206 | |||||||||
00073207 | |||||||||
00073208 | |||||||||
00118464 | |||||||||
00118465 | |||||||||
Ortholog (33) | |||||||||
Paralog | WBGene00022808 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | R09H10.3 is orthologous to the human gene TRANSTHYRETIN (PREALBUMIN, AMYLOIDOSIS TYPE I) (TTR; OMIM:176300), which when mutated leads to disease. | Curator_confirmed (2) | ||||||
Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
Automated_description | Enables identical protein binding activity. Predicted to be involved in purine nucleobase metabolic process. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; carpal tunnel syndrome 1; colorectal adenoma; and gastrointestinal system cancer (multiple). Is an ortholog of human TTR (transthyretin). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model (13) | ||||||||
Molecular_info | Corresponding_CDS | R09H10.3a | |||||||
R09H10.3b | |||||||||
Corresponding_CDS_history | R09H10.3:wp101 | ||||||||
Corresponding_transcript | R09H10.3a.1 | ||||||||
R09H10.3b.1 | |||||||||
Other_sequence (19) | |||||||||
Associated_feature | WBsf646315 | ||||||||
WBsf646316 | |||||||||
WBsf013952 | |||||||||
WBsf229008 | |||||||||
Experimental_info (7) | |||||||||
Map_info | Positive | Positive_clone | R09H10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 4.64132 | |||||||
Reference | WBPaper00032062 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00065331 | |||||||||
Method | Gene |