WormBase Tree Display for Gene: WBGene00010545
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WBGene00010545 | SMap | S_parent | Sequence | CHROMOSOME_III | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | cbp-2 | Person_evidence | WBPerson2264 | |||
Sequence_name | K03H1.10 | ||||||
Molecular_name | K03H1.10 | ||||||
K03H1.10.1 | |||||||
CE00571 | |||||||
K03H1.10.2 | |||||||
Other_name | CELE_K03H1.10 | Accession_evidence | NDB | BX284603 | |||
Public_name | cbp-2 | ||||||
DB_info | Database | AceView | gene | 3L15 | |||
WormQTL | gene | WBGene00010545 | |||||
WormFlux | gene | WBGene00010545 | |||||
NDB | locus_tag | CELE_K03H1.10 | |||||
NCBI | gene | 186960 | |||||
RefSeq | protein | NM_066800.5 | |||||
KEGG | KEGG_id | 2.3.1.48 | |||||
NemaPath | KEGG_id | 2.3.1.48 | |||||
TREEFAM | TREEFAM_ID | TF343807 | |||||
TrEMBL | UniProtAcc | G5EBG3 | |||||
UniProt_GCRP | UniProtAcc | G5EBG3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cbp | ||||||
Allele (34) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00009501 | ||||||
00009502 | |||||||
00009503 | |||||||
00009504 | |||||||
00009505 | |||||||
00117901 | |||||||
00117902 | |||||||
00117903 | |||||||
Ortholog | WBGene00144836 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||
WBGene00086870 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||
WBGene00062258 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
CSP31.g8211 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||
Cang_2012_03_13_11831.g23436 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||
chrIII_pilon.g8742 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00104833 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||
WBGene00293376 | Trichuris muris | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00000366 | Caenorhabditis elegans | From_analysis (2) | ||||
WBGene00008209 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00009595 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00016220 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00016221 | Caenorhabditis elegans | From_analysis (3) | |||||
Structured_description | Automated_description | Predicted to enable histone acetyltransferase activity; metal ion binding activity; and transcription coregulator activity. Predicted to be involved in chromatin remodeling and regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K03H1.10 | |||||
Corresponding_transcript | K03H1.10.1 | ||||||
K03H1.10.2 | |||||||
Associated_feature | WBsf717099 | ||||||
Experimental_info | RNAi_result (36) | ||||||
Expr_pattern | Expr1015785 | ||||||
Expr1153555 | |||||||
Expr2009743 | |||||||
Expr2027983 | |||||||
Drives_construct | WBCnstr00031339 | ||||||
Construct_product | WBCnstr00031339 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (225) | |||||||
Interaction | WBInteraction000136845 | ||||||
WBInteraction000143177 | |||||||
WBInteraction000148811 | |||||||
WBInteraction000218206 | |||||||
WBInteraction000314742 | |||||||
WBInteraction000384776 | |||||||
WBInteraction000457180 | |||||||
WBInteraction000539877 | |||||||
WBInteraction000550930 | |||||||
Map_info | Map | III | Position | 1.1976 | |||
Positive | Positive_clone | K03H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00061178 | |||||||
WBPaper00065308 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |