WormBase Tree Display for Gene: WBGene00009940
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WBGene00009940 | SMap | S_parent | Sequence | F52F12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | strl-1 | Person_evidence | WBPerson6837 | |||
Sequence_name | F52F12.7 | ||||||
Molecular_name | F52F12.7a | ||||||
F52F12.7a.1 | |||||||
CE42711 | |||||||
F52F12.7b | |||||||
CE10852 | |||||||
F52F12.7b.1 | |||||||
Other_name | CELE_F52F12.7 | Accession_evidence | NDB | BX284601 | |||
Public_name | strl-1 | ||||||
DB_info | Database | AceView | gene | 1K507 | |||
WormQTL | gene | WBGene00009940 | |||||
WormFlux | gene | WBGene00009940 | |||||
NDB | locus_tag | CELE_F52F12.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009940|UniProtKB=O17883 | |||||
family | PTHR46121 | ||||||
NCBI | gene | 172846 | |||||
RefSeq | protein | NM_001264322.2 | |||||
NM_001264321.3 | |||||||
SwissProt | UniProtAcc | O17883 | |||||
TREEFAM | TREEFAM_ID | TF354285 | |||||
TrEMBL | UniProtAcc | F5GUI0 | |||||
UniProt_GCRP | UniProtAcc | O17883 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | strl | ||||||
Allele (24) | |||||||
Strain | WBStrain00037510 | ||||||
In_cluster | conserved_miRNA_siRNA_cluster | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00030887 | ||||||
00030888 | |||||||
00030889 | |||||||
00030890 | |||||||
00117496 | |||||||
Ortholog (44) | |||||||
Paralog | WBGene00012127 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00010505 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00017826 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | F52F12.7 is orthologous to the human gene STEROIDOGENIC ACUTE REGULATORY PROTEIN (STAR; OMIM:600617), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||
WBPerson567 | |||||||
Date_last_updated | 06 Aug 2004 00:00:00 | ||||||
Automated_description | Predicted to enable lipid binding activity. Predicted to be involved in vesicle tethering to endoplasmic reticulum. Predicted to be located in endoplasmic reticulum membrane; endoplasmic reticulum-endosome membrane contact site; and late endosome membrane. Human ortholog(s) of this gene implicated in congenital adrenal hyperplasia. Is an ortholog of human STAR (steroidogenic acute regulatory protein). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0050811 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11359) | ||
Molecular_info | Corresponding_CDS | F52F12.7a | |||||
F52F12.7b | |||||||
Corresponding_CDS_history | F52F12.7:wp192 | ||||||
Corresponding_transcript | F52F12.7a.1 | ||||||
F52F12.7b.1 | |||||||
Other_sequence (17) | |||||||
Associated_feature | WBsf655797 | ||||||
WBsf656811 | |||||||
WBsf656812 | |||||||
WBsf218372 | |||||||
Experimental_info | RNAi_result | WBRNAi00048013 | Inferred_automatically | RNAi_primary | |||
WBRNAi00032633 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1028193 | ||||||
Expr1034331 | |||||||
Expr1151828 | |||||||
Expr2017097 | |||||||
Expr2035233 | |||||||
Drives_construct | WBCnstr00031799 | ||||||
Construct_product | WBCnstr00031799 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (135) | |||||||
Interaction | WBInteraction000264141 | ||||||
WBInteraction000354274 | |||||||
WBInteraction000373343 | |||||||
WBInteraction000420659 | |||||||
WBInteraction000459459 | |||||||
WBInteraction000461309 | |||||||
Map_info | Map | I | Position | 4.06833 | |||
Positive | Positive_clone | F52F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (5) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |