WormBase Tree Display for Gene: WBGene00004277
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WBGene00004277 | SMap | S_parent | Sequence | Y92C3B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | rab-18 | Person_evidence | WBPerson451 | |||||
Sequence_name | Y92C3B.3 | ||||||||
Molecular_name | Y92C3B.3a | ||||||||
Y92C3B.3a.1 | |||||||||
CE34438 | |||||||||
Y92C3B.3b | |||||||||
CE27340 | |||||||||
Y92C3B.3a.2 | |||||||||
Y92C3B.3b.1 | |||||||||
Y92C3B.3b.2 | |||||||||
Other_name | pra-1 | Accession_evidence | EMBL | U23938 | |||||
CELE_Y92C3B.3 | Accession_evidence | NDB | BX284603 | ||||||
Public_name | rab-18 | ||||||||
DB_info | Database | AceView | gene | 3C168 | |||||
WormQTL | gene | WBGene00004277 | |||||||
WormFlux | gene | WBGene00004277 | |||||||
NDB | locus_tag | CELE_Y92C3B.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004277|UniProtKB=Q8MXS1 | |||||||
family | PTHR24073 | ||||||||
NCBI | gene | 175272 | |||||||
RefSeq | protein | NM_171861.6 | |||||||
NM_171081.7 | |||||||||
SwissProt | UniProtAcc | Q8MXS1 | |||||||
TREEFAM | TREEFAM_ID | TF313448 | |||||||
UniProt_GCRP | UniProtAcc | Q8MXS1 | |||||||
OMIM | gene | 602207 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rab | ||||||||
Allele (79) | |||||||||
Strain | WBStrain00032332 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00084671 | ||||||||
00084672 | |||||||||
00084673 | |||||||||
00084674 | |||||||||
00084675 | |||||||||
00084676 | |||||||||
00084677 | |||||||||
00084678 | |||||||||
00112596 | |||||||||
00112597 | |||||||||
Contained_in_operon | CEOP3052 | ||||||||
Ortholog (43) | |||||||||
Paralog (32) | |||||||||
Structured_description (2) | |||||||||
Disease_info | Potential_model | DOID:0110718 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14244) | ||||
Molecular_info | Corresponding_CDS | Y92C3B.3a | |||||||
Y92C3B.3b | |||||||||
Corresponding_CDS_history | Y92C3B.3a:wp101 | ||||||||
Corresponding_transcript | Y92C3B.3a.1 | ||||||||
Y92C3B.3a.2 | |||||||||
Y92C3B.3b.1 | |||||||||
Y92C3B.3b.2 | |||||||||
Other_sequence (82) | |||||||||
Associated_feature | WBsf650835 | ||||||||
WBsf981394 | |||||||||
WBsf991220 | |||||||||
WBsf226180 | |||||||||
Experimental_info | RNAi_result | WBRNAi00091946 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00065403 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083707 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083565 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083796 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058626 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083371 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083543 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083602 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00061380 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019842 | ||||||||
Expr1032115 | |||||||||
Expr1162045 | |||||||||
Expr2015217 | |||||||||
Expr2033451 | |||||||||
Microarray_results (27) | |||||||||
Expression_cluster (94) | |||||||||
Interaction (12) | |||||||||
Map_info | Map | III | Position | -24.4278 | Error | 0.161517 | |||
Positive | Positive_clone | Y92C3B | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 5497 | |||||||
5543 | |||||||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |