WormBase Tree Display for Gene: WBGene00015064
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| WBGene00015064 | SMap | S_parent | Sequence | B0228 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0228.7 | |||||||
| Molecular_name | B0228.7 | ||||||||
| B0228.7.1 | |||||||||
| CE34630 | |||||||||
| B0228.7.2 | |||||||||
| Other_name | CELE_B0228.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | B0228.7 | ||||||||
| DB_info | Database | AceView | gene | 2I48 | |||||
| WormQTL | gene | WBGene00015064 | |||||||
| SignaLink | protein | WBGene00015064 | |||||||
| WormFlux | gene | WBGene00015064 | |||||||
| NDB | locus_tag | CELE_B0228.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015064|UniProtKB=Q09438 | |||||||
| family | PTHR42679 | ||||||||
| NCBI | gene | 174252 | |||||||
| RefSeq | protein | NM_001381506.3 | |||||||
| KEGG | KEGG_id | 2.4.2.28 | |||||||
| NemaPath | KEGG_id | 2.4.2.28 | |||||||
| SwissProt | UniProtAcc | Q09438 | |||||||
| TREEFAM | TREEFAM_ID | TF312883 | |||||||
| UniProt_GCRP | UniProtAcc | Q09438 | |||||||
| OMIM | gene | 156540 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| Strain | WBStrain00001292 | ||||||||
| WBStrain00001293 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00019298 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable S-methyl-5-thioadenosine phosphorylase activity. Predicted to be involved in L-methionine salvage from methylthioadenosine. Predicted to be located in cytosol. Expressed in Ea and Ep. Human ortholog(s) of this gene implicated in common bile duct neoplasm; diaphyseal medullary stenosis with malignant fibrous histiocytoma; and pancreatic cancer. Is an ortholog of human MTAP (methylthioadenosine phosphorylase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:4608 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7413) | ||||
| DOID:1793 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7413) | ||||||
| DOID:0050625 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7413) | ||||||
| DOID:0080664 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7413) | ||||||
| Molecular_info | Corresponding_CDS | B0228.7 | |||||||
| Corresponding_CDS_history | B0228.7:wp104 | ||||||||
| Corresponding_transcript | B0228.7.1 | ||||||||
| B0228.7.2 | |||||||||
| Other_sequence | EW744026.1 | ||||||||
| ACC07705_1 | |||||||||
| Oden_isotig05916 | |||||||||
| AS02218 | |||||||||
| Dviv_isotig11257 | |||||||||
| Tcir_isotig20886 | |||||||||
| AS14934 | |||||||||
| TSC06345_1 | |||||||||
| TCC00571_1 | |||||||||
| FE912502.1 | |||||||||
| GR978596.1 | |||||||||
| Dviv_isotig11258 | |||||||||
| AS01412 | |||||||||
| FD514607.1 | |||||||||
| Oden_isotig05917 | |||||||||
| AS16838 | |||||||||
| HBC24945_1 | |||||||||
| FE911492.1 | |||||||||
| CBC07005_1 | |||||||||
| Oden_isotig05915 | |||||||||
| OOC00910_1 | |||||||||
| HCC12481_1 | |||||||||
| Oden_isotig05912 | |||||||||
| FD514714.1 | |||||||||
| BMC08425_1 | |||||||||
| CSC00475_1 | |||||||||
| Oden_isotig05913 | |||||||||
| EX537964.1 | |||||||||
| LSC01715_1 | |||||||||
| Tcir_isotig10498 | |||||||||
| Oden_isotig05914 | |||||||||
| EX556258.1 | |||||||||
| ES408671.1 | |||||||||
| FE919945.1 | |||||||||
| ASC01203_2 | |||||||||
| HC00335 | |||||||||
| JI173845.1 | |||||||||
| JO467971.1 | |||||||||
| SC00439 | |||||||||
| CA840758.1 | |||||||||
| HC01200 | |||||||||
| Name_isotig01471 | |||||||||
| ASC01203_1 | |||||||||
| TX02099 | |||||||||
| Acan_isotig13392 | |||||||||
| FE919654.1 | |||||||||
| EW743386.1 | |||||||||
| Dviv_isotig11260 | |||||||||
| Dviv_isotig11259 | |||||||||
| CD203577.1 | |||||||||
| Acan_isotig11202 | |||||||||
| Hbac_isotig05523 | |||||||||
| EX563085.1 | |||||||||
| Associated_feature | WBsf650267 | ||||||||
| WBsf650268 | |||||||||
| WBsf717712 | |||||||||
| WBsf988551 | |||||||||
| WBsf223391 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00038767 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00090575 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028014 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094845 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009610 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram2076 | ||||||||
| Expr60 | |||||||||
| Expr5027 | |||||||||
| Expr1010623 | |||||||||
| Expr1036438 | |||||||||
| Expr1142976 | |||||||||
| Expr2000073 | |||||||||
| Expr2018290 | |||||||||
| Drives_construct | WBCnstr00002185 | ||||||||
| WBCnstr00002186 | |||||||||
| WBCnstr00029116 | |||||||||
| Construct_product | WBCnstr00029116 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Positive | Positive_clone | B0228 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.560503 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
