WormBase Tree Display for Gene: WBGene00016019

WBGene00016019 SMap: S_parent: Sequence: C23H3
  Identity: Version: 2
    Name: CGC_name: ascc-1
      Sequence_name: C23H3.3
      Molecular_name: C23H3.3b
        C23H3.3a
        CE41870
        C23H3.3b.1
      Other_name: CELE_C23H3.3 Accession_evidence: NDB BX284602
      Public_name: ascc-1
    DB_info: Database: AceView gene 2A349
        WormQTL gene WBGene00016019
        WormFlux gene WBGene00016019
        NDB locus_tag CELE_C23H3.3
        Panther gene CAEEL|WormBase=WBGene00016019|UniProtKB=A9Z1L6
          family PTHR13360
        NCBI gene 182817
        RefSeq protein NM_001129119.3
            NR_132568.1
        TREEFAM TREEFAM_ID TF314479
        TrEMBL UniProtAcc A9Z1L6
        UniProt_GCRP UniProtAcc A9Z1L6
        OMIM gene 614215
        RNAcentral URSid URS00008402AF
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 13 Nov 2017 15:54:28 WBPerson1983 Name_change: CGC_name: ascc-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ascc
    Allele (52)
    RNASeq_FPKM (74)
    GO_annotation: 00005547
      00005548
      00121708
      00121709
      00121710
    Contained_in_operon: CEOP2004
    Ortholog: WBGene00029173 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00072137 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00149037 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121363 Caenorhabditis japonica From_analysis: OMA
      WBGene00114118 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00222586 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g7114 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14139 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16553 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18376 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1639 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25548 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g837 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7573 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g13152 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g20423 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22559 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-C23H3.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold605.g5565 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_05258.g34674 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_05896 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_007841 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g9641 Panagrellus redivivus From_analysis: WormBase-Compara
      chrII_pilon.g3036 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00247000 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263166 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286290 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0033475 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050417-80 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:24268 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
      MGI:1916340 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1359255 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in Barrett's esophagus. Is an ortholog of human ASCC1 (activating signal cointegrator 1 complex subunit 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:9206 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:24268)
      EFO:MONDO:0000209 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:24268)
  Molecular_info: Corresponding_CDS: C23H3.3b
    Corresponding_CDS_history: C23H3.3:wp185
      C23H3.3a:wp247
    Corresponding_transcript: C23H3.3a
      C23H3.3b.1
    Other_sequence: CBC02716_1
      CJC00705_1
    Associated_feature: WBsf220713
      WBsf220714
  Experimental_info: RNAi_result: WBRNAi00029115 Inferred_automatically: RNAi_primary
      WBRNAi00082514 Inferred_automatically: RNAi_primary
      WBRNAi00041021 Inferred_automatically: RNAi_primary
      WBRNAi00077482 Inferred_automatically: RNAi_primary
      WBRNAi00011055 Inferred_automatically: RNAi_primary
      WBRNAi00082574 Inferred_automatically: RNAi_primary
      WBRNAi00081651 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017465
      Expr1036843
      Expr1145060
      Expr2001015
      Expr2019233
    Microarray_results (23)
    Expression_cluster (102)
    Interaction (22)
  Map_info: Positive: Positive_clone: C23H3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -17.4519
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene