WormBase Tree Display for Gene: WBGene00004199

WBGene00004199 Evidence: Paper_evidence: WBPaper00005877
  SMap: S_parent: Sequence: R07H5
  Identity: Version: 1
    Name: CGC_name: prx-14
      Sequence_name: R07H5.1
      Molecular_name: R07H5.1
        R07H5.1.1
        CE12550
        R07H5.1.2
      Other_name: CELE_R07H5.1 Accession_evidence: NDB BX284604
      Public_name: prx-14
    DB_info: Database: AceView gene 4L949
        WormQTL gene WBGene00004199
        WormFlux gene WBGene00004199
        NDB locus_tag CELE_R07H5.1
        Panther gene CAEEL|WormBase=WBGene00004199|UniProtKB=Q93930
          family PTHR23058
        NCBI gene 178026
        RefSeq protein NM_069696.5
        TREEFAM TREEFAM_ID TF316010
        TrEMBL UniProtAcc Q93930
        UniProt_GCRP UniProtAcc Q93930
        OMIM gene 601791
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: prx
    Allele (12)
    Strain: WBStrain00051404
    RNASeq_FPKM (74)
    GO_annotation (14)
    Contained_in_operon: CEOP4424
    Ortholog: WBGene00062547 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028373 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00157450 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00132344 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00081053 Caenorhabditis remanei From_analysis: TreeFam
      CSP21.g4965 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15743 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2362 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13601 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10213 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g6446 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6844 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1515 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17267 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-prx-14 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8048 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00125.g4994 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_014073 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04529 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g10832 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40315500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11792 Caenorhabditis elegans From_analysis: WormBase-Compara
      HGNC:8856 Homo sapiens From_analysis: Inparanoid
            EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
            PhylomeDB
      SGD:S000003121 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
            PhylomeDB
      FB:FBgn0037020 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-060130-169 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      MGI:1927868 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
      RGD:68336 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
    Structured_description: Automated_description: Predicted to enable signaling receptor binding activity. Predicted to be involved in protein import into peroxisome matrix, docking. Predicted to be located in peroxisomal membrane. Predicted to be part of peroxisomal importomer complex. Human ortholog(s) of this gene implicated in peroxisome biogenesis disorder 13A. Is an ortholog of human PEX14 (peroxisomal biogenesis factor 14). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0080487 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:8856)
  Molecular_info: Corresponding_CDS: R07H5.1
    Corresponding_transcript: R07H5.1.1
      R07H5.1.2
    Other_sequence (35)
    Associated_feature: WBsf229117
  Experimental_info: RNAi_result: WBRNAi00106019 Inferred_automatically: RNAi_primary
      WBRNAi00051506 Inferred_automatically: RNAi_primary
      WBRNAi00061599 Inferred_automatically: RNAi_primary
      WBRNAi00034726 Inferred_automatically: RNAi_primary
      WBRNAi00105965 Inferred_automatically: RNAi_primary
      WBRNAi00009049 Inferred_automatically: RNAi_primary
      WBRNAi00026061 Inferred_automatically: RNAi_primary
      WBRNAi00034728 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010266
      Expr1032057
      Expr1155185
      Expr2015122
      Expr2033360
    Drives_construct: WBCnstr00035641
    Construct_product: WBCnstr00035641
    Microarray_results (21)
    Expression_cluster (100)
    Interaction (27)
  Map_info: Map: IV Position: 4.92158
    Positive: Positive_clone: R07H5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00056693
    WBPaper00059323
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene