WormBase Tree Display for Gene: WBGene00016019

WBGene00016019 SMap: S_parent: Sequence: C23H3
  Identity: Version: 2
    Name: CGC_name: ascc-1
      Sequence_name: C23H3.3
      Molecular_name: C23H3.3b
        C23H3.3a
        CE41870
        C23H3.3b.1
      Other_name: CELE_C23H3.3 Accession_evidence: NDB BX284602
      Public_name: ascc-1
    DB_info: Database: AceView gene 2A349
        WormQTL gene WBGene00016019
        WormFlux gene WBGene00016019
        NDB locus_tag CELE_C23H3.3
        Panther gene CAEEL|WormBase=WBGene00016019|UniProtKB=A9Z1L6
          family PTHR13360
        NCBI gene 182817
        RefSeq protein NM_001129119.3
            NR_132568.1
        TREEFAM TREEFAM_ID TF314479
        TrEMBL UniProtAcc A9Z1L6
        UniProt_GCRP UniProtAcc A9Z1L6
        OMIM gene 614215
        RNAcentral URSid URS00008402AF
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 13 Nov 2017 15:54:28 WBPerson1983 Name_change: CGC_name: ascc-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ascc
    Allele (52)
    RNASeq_FPKM (74)
    GO_annotation: 00005547
      00005548
      00121708
      00121709
      00121710
    Contained_in_operon: CEOP2004
    Ortholog (32)
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in Barrett's esophagus. Is an ortholog of human ASCC1 (activating signal cointegrator 1 complex subunit 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:9206 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:24268)
      EFO:MONDO:0000209 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:24268)
  Molecular_info: Corresponding_CDS: C23H3.3b
    Corresponding_CDS_history: C23H3.3:wp185
      C23H3.3a:wp247
    Corresponding_transcript: C23H3.3a
      C23H3.3b.1
    Other_sequence: CBC02716_1
      CJC00705_1
    Associated_feature: WBsf220713
      WBsf220714
  Experimental_info: RNAi_result: WBRNAi00029115 Inferred_automatically: RNAi_primary
      WBRNAi00082514 Inferred_automatically: RNAi_primary
      WBRNAi00041021 Inferred_automatically: RNAi_primary
      WBRNAi00077482 Inferred_automatically: RNAi_primary
      WBRNAi00011055 Inferred_automatically: RNAi_primary
      WBRNAi00082574 Inferred_automatically: RNAi_primary
      WBRNAi00081651 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017465
      Expr1036843
      Expr1145060
      Expr2001015
      Expr2019233
    Microarray_results: SMD_C23H3.3
      179923_at
      A_12_P104690
      A_12_P141960
      A_12_P141961
      Aff_C23H3.3
      GPL13394_WBGene00016019
      GPL13914_C23H3.3
      GPL14144_C23H3.3b_646-705_0.910_17_C
      GPL14144_C23H3.3b_784-843_0.922_10_B
      GPL14144_C23H3.3b_940-999_0.959_1_A
      GPL19516_CGZ0005550
      GPL19516_CGZ0005551
      GPL21109_C23H3.3a
      GPL21109_C23H3.3b
      GPL3518_CE08322
      GPL8304_CE_WBGene00016019_A
      GPL8304_CE_WBGene00016019_B
      GPL8673_C23H3_3P00063
      GPL8673_C23H3_3P00509
      GPL8673_C23H3_3P00807
      GPL9450_C23H3.3
      cea2.i.09396
    Expression_cluster (102)
    Interaction (22)
  Map_info: Positive: Positive_clone: C23H3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -17.4519
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene