WormBase Tree Display for Gene: WBGene00010349
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WBGene00010349 | SMap | S_parent | Sequence | H01G02 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | dyf-18 | Paper_evidence | WBPaper00039866 | |||
Person_evidence | WBPerson2136 | ||||||
Sequence_name | H01G02.2 | ||||||
Molecular_name | H01G02.2 | ||||||
H01G02.2.1 | |||||||
CE35567 | |||||||
Other_name | CELE_H01G02.2 | Accession_evidence | NDB | BX284604 | |||
Public_name | dyf-18 | ||||||
DB_info | Database | AceView | gene | 4M562 | |||
WormQTL | gene | WBGene00010349 | |||||
SignaLink | protein | WBGene00010349 | |||||
WormFlux | gene | WBGene00010349 | |||||
NDB | locus_tag | CELE_H01G02.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00010349|UniProtKB=O17903 | |||||
family | PTHR24056 | ||||||
NCBI | gene | 186662 | |||||
RefSeq | protein | NM_069831.3 | |||||
TREEFAM | TREEFAM_ID | TF327240 | |||||
TrEMBL | UniProtAcc | O17903 | |||||
UniProt_GCRP | UniProtAcc | O17903 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dyf | ||||||
Allele (36) | |||||||
Possibly_affected_by | WBVar02152910 | ||||||
Strain | WBStrain00002496 | ||||||
WBStrain00036653 | |||||||
WBStrain00007240 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00030969 | ||||||
00030970 | |||||||
00030971 | |||||||
00030972 | |||||||
00117781 | |||||||
00117782 | |||||||
00117783 | |||||||
Ortholog (28) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in phosphorylation. Predicted to be located in nucleus. Expressed in amphid neurons; head; inner labial neurons; outer labial neurons; and phasmid neurons. Is an ortholog of human CDK20 (cyclin dependent kinase 20). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0050741 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21420) | ||
Molecular_info | Corresponding_CDS | H01G02.2 | |||||
Corresponding_CDS_history | H01G02.2:wp109 | ||||||
Corresponding_transcript | H01G02.2.1 | ||||||
Other_sequence | Tcol_isotig16440 | ||||||
GO250430.1 | |||||||
Dviv_isotig12958 | |||||||
MJ02085 | |||||||
FD514663.1 | |||||||
CJC03135_1 | |||||||
CSC01740_1 | |||||||
MJC01910_1 | |||||||
JI166841.1 | |||||||
Dviv_isotig12959 | |||||||
Associated_feature (11) | |||||||
Experimental_info | RNAi_result | WBRNAi00115724 | Inferred_automatically | RNAi_primary | |||
WBRNAi00033639 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016159 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049254 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3727 | ||||||
Expr6270 | |||||||
Expr9627 | |||||||
Expr13717 | |||||||
Expr15148 | |||||||
Expr1011209 | |||||||
Expr1152996 | |||||||
Expr2011130 | |||||||
Expr2029366 | |||||||
Drives_construct | WBCnstr00003083 | ||||||
WBCnstr00011631 | |||||||
WBCnstr00014188 | |||||||
WBCnstr00031482 | |||||||
WBCnstr00039954 | |||||||
Construct_product | WBCnstr00014188 | ||||||
WBCnstr00031482 | |||||||
WBCnstr00039954 | |||||||
WBCnstr00042014 | |||||||
Microarray_results | SMD_H01G02.2 | ||||||
192753_at | |||||||
A_12_P115635 | |||||||
Aff_H01G02.2 | |||||||
GPL13394_WBGene00010349 | |||||||
GPL13914_H01G02.2 | |||||||
GPL14144_H01G02.2_411-470_0.874_24_C | |||||||
GPL14144_H01G02.2_558-617_0.942_2_A | |||||||
GPL14144_H01G02.2_658-717_0.913_5_B | |||||||
GPL19516_CGZ0025722 | |||||||
GPL21109_H01G02.2 | |||||||
GPL3518_CE11556 | |||||||
GPL8304_CE_WBGene00010349_A | |||||||
GPL8673_H01G02_2P00002 | |||||||
GPL8673_H01G02_2P00069 | |||||||
GPL8673_H01G02_2P00842 | |||||||
GPL9450_H01G02.2 | |||||||
cea2.i.26864 | |||||||
Expression_cluster (146) | |||||||
Interaction (21) | |||||||
Map_info | Map | IV | Position | 5.29836 | Error | 0.002557 | |
Positive | Positive_clone | H01G02 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (17) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |