WormBase Tree Display for Gene: WBGene00003652
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WBGene00003652 | Evidence | Paper_evidence | WBPaper00003416 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | CHROMOSOME_I | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | nhr-62 | Person_evidence | WBPerson600 | |||||
Sequence_name | Y67A6A.2 | ||||||||
Molecular_name (12) | |||||||||
Other_name | CELE_Y67A6A.2 | Accession_evidence | NDB | BX284601 | |||||
Public_name | nhr-62 | ||||||||
DB_info | Database | AceView | gene | 1K419 | |||||
WormQTL | gene | WBGene00003652 | |||||||
WormFlux | gene | WBGene00003652 | |||||||
NDB | locus_tag | CELE_Y67A6A.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003652|UniProtKB=O02279 | |||||||
family | PTHR47630 | ||||||||
NCBI | gene | 172836 | |||||||
RefSeq | protein | NM_001373584.2 | |||||||
NM_001136327.4 | |||||||||
NM_060206.8 | |||||||||
NM_001381160.1 | |||||||||
SwissProt | UniProtAcc | O02279 | |||||||
TREEFAM | TREEFAM_ID | TF315528 | |||||||
TrEMBL | UniProtAcc | A0A565CXP8 | |||||||
A0A565CXN2 | |||||||||
UniProt_GCRP | UniProtAcc | O02279 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (67) | |||||||||
Strain | WBStrain00035350 | ||||||||
WBStrain00035351 | |||||||||
WBStrain00035352 | |||||||||
WBStrain00036320 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (13) | |||||||||
Ortholog (31) | |||||||||
Paralog (217) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in several structures, including excretory cell; intestine; neurons; spermatheca; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y67A6A.2a | |||||||
Y67A6A.2b | |||||||||
Y67A6A.2c | |||||||||
Y67A6A.2d | |||||||||
Corresponding_CDS_history | Y67A6A.2:wp47 | ||||||||
Corresponding_transcript | Y67A6A.2a.1 | ||||||||
Y67A6A.2b.1 | |||||||||
Y67A6A.2c.1 | |||||||||
Y67A6A.2d.1 | |||||||||
Other_sequence (20) | |||||||||
Associated_feature (11) | |||||||||
Transcription_factor | WBTranscriptionFactor000667 | ||||||||
Experimental_info | RNAi_result | WBRNAi00115756 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00037723 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00004776 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00003972 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070622 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00057976 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00070623 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (12) | |||||||||
Drives_construct | WBCnstr00001160 | ||||||||
WBCnstr00001161 | |||||||||
WBCnstr00001162 | |||||||||
WBCnstr00012882 | |||||||||
WBCnstr00017066 | |||||||||
WBCnstr00018060 | |||||||||
WBCnstr00018271 | |||||||||
WBCnstr00018272 | |||||||||
WBCnstr00035969 | |||||||||
Construct_product | WBCnstr00017066 | ||||||||
WBCnstr00018060 | |||||||||
WBCnstr00018272 | |||||||||
WBCnstr00035969 | |||||||||
Regulate_expr_cluster | WBPaper00044037:eat-2_regulated_nhr-62_dependent | ||||||||
Microarray_results | SMD_K10C3.1 | ||||||||
SMD_Y67A6A.2 | |||||||||
192819_at | |||||||||
A_12_P100420 | |||||||||
Aff_Y67A6A.2 | |||||||||
GPL13394_WBGene00003652 | |||||||||
GPL13914_Y67A6A.2 | |||||||||
GPL14144_Y67A6A.2a_1027-1086_0.923_5_B | |||||||||
GPL14144_Y67A6A.2a_1297-1356_0.939_2_A | |||||||||
GPL14144_Y67A6A.2a_847-906_0.914_11_C | |||||||||
GPL19516_CGZ0052446 | |||||||||
GPL19516_CGZ0052447 | |||||||||
GPL19516_CGZ0052448 | |||||||||
GPL21109_Y67A6A.2a | |||||||||
GPL3518_CE27305 | |||||||||
GPL8304_CE_WBGene00003652_A | |||||||||
GPL8304_CE_WBGene00003652_B | |||||||||
GPL8673_Y67A6A_2P00101 | |||||||||
GPL8673_Y67A6A_2P00980 | |||||||||
GPL8673_Y67A6A_2P01401 | |||||||||
GPL9450_Y67A6A.2 | |||||||||
cea2.p.23335 | |||||||||
Expression_cluster (208) | |||||||||
Interaction (20) | |||||||||
Map_info | Map | I | Position | 3.91416 | Error | 0.00372 | |||
Positive | Positive_clone | K10C3 | |||||||
Y67A6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 5233 | |||||||
4721 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027309 | ||||||||
WBPaper00044037 | |||||||||
WBPaper00053206 | |||||||||
WBPaper00053706 | |||||||||
WBPaper00062388 | |||||||||
WBPaper00062515 | |||||||||
WBPaper00064543 | |||||||||
Remark (2) | |||||||||
Method | Gene |