WormBase Tree Display for Gene: WBGene00000109

WBGene00000109 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 1
    Name: CGC_name: alh-3 Person_evidence: WBPerson651
      Sequence_name: F36H1.6
      Molecular_name: F36H1.6
        F36H1.6.1
        CE40358
      Other_name: CELE_F36H1.6 Accession_evidence: NDB BX284604
      Public_name: alh-3
    DB_info: Database: AceView gene 4L789
        WormQTL gene WBGene00000109
        WormFlux gene WBGene00000109
        NDB locus_tag CELE_F36H1.6
        Panther gene CAEEL|WormBase=WBGene00000109|UniProtKB=G5ECV9
          family PTHR11699
        NCBI gene 177999
        RefSeq protein NM_069653.9
        KEGG KEGG_id 1.5.1.6
        NemaPath KEGG_id 1.5.1.6
        TREEFAM TREEFAM_ID TF354242
        TrEMBL UniProtAcc G5ECV9
        UniProt_GCRP UniProtAcc G5ECV9
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: alh
    Allele (42)
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog (41)
    Paralog (11)
    Structured_description: Concise_description: alh-3 encodes an aldehyde dehydrogenase predicted to be mitochondrial. Paper_evidence: WBPaper00004424
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable aldehyde dehydrogenase (NAD+) activity and formyltetrahydrofolate dehydrogenase activity. Predicted to be involved in 10-formyltetrahydrofolate catabolic process; biosynthetic process; and one-carbon metabolic process. Predicted to be located in cytoplasm. Is an ortholog of human ALDH1L1 (aldehyde dehydrogenase 1 family member L1) and ALDH1L2 (aldehyde dehydrogenase 1 family member L2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F36H1.6
    Corresponding_CDS_history: F36H1.6:wp162
    Corresponding_transcript: F36H1.6.1
    Other_sequence (173)
    Associated_feature: WBsf646346
      WBsf655052
      WBsf229085
  Experimental_info: RNAi_result: WBRNAi00014439 Inferred_automatically: RNAi_primary
      WBRNAi00046519 Inferred_automatically: RNAi_primary
      WBRNAi00031873 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028219
      Expr1030057
      Expr1150404
      Expr2009305
      Expr2027541
    Drives_construct: WBCnstr00037725
    Construct_product: WBCnstr00037725
    Microarray_results (24)
    Expression_cluster (131)
    Interaction: WBInteraction000139604
      WBInteraction000139779
      WBInteraction000139798
      WBInteraction000139860
      WBInteraction000140046
      WBInteraction000140101
      WBInteraction000140228
      WBInteraction000140278
      WBInteraction000140279
      WBInteraction000140324
      WBInteraction000140979
      WBInteraction000141006
      WBInteraction000141415
      WBInteraction000142224
      WBInteraction000143965
      WBInteraction000148766
      WBInteraction000149244
      WBInteraction000150873
      WBInteraction000163297
      WBInteraction000163298
      WBInteraction000163504
      WBInteraction000163505
      WBInteraction000163506
      WBInteraction000163655
      WBInteraction000213577
      WBInteraction000224509
      WBInteraction000246409
      WBInteraction000250770
      WBInteraction000254842
      WBInteraction000279052
      WBInteraction000279054
      WBInteraction000287115
      WBInteraction000289692
      WBInteraction000289977
      WBInteraction000296378
      WBInteraction000308088
      WBInteraction000334064
      WBInteraction000335817
      WBInteraction000361140
      WBInteraction000368681
      WBInteraction000374817
      WBInteraction000410807
      WBInteraction000421788
      WBInteraction000450865
      WBInteraction000458065
      WBInteraction000467148
      WBInteraction000469438
      WBInteraction000469497
      WBInteraction000517502
      WBInteraction000517503
      WBInteraction000517505
      WBInteraction000517506
      WBInteraction000517507
      WBInteraction000517511
      WBInteraction000517512
      WBInteraction000517513
      WBInteraction000517514
      WBInteraction000517517
      WBInteraction000517518
      WBInteraction000550125
      WBInteraction000562988
      WBInteraction000565254
      WBInteraction000573344
      WBInteraction000581962
      WBInteraction000504814
      WBInteraction000542489
      WBInteraction000542490
  Map_info: Map: IV Position: 4.78347 Error: 0.000714
    Positive: Positive_clone: F36H1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031335
    WBPaper00035664
    WBPaper00036127
    WBPaper00038491
    WBPaper00042257
    WBPaper00055090
    WBPaper00055896
    WBPaper00064989
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene