WormBase Tree Display for Gene: WBGene00003264
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WBGene00003264 | Evidence | Paper_evidence | WBPaper00004927 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y62F5A | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | mir-36 | Person_evidence | WBPerson18 | |||||
Sequence_name | Y62F5A.3 | ||||||||
Molecular_name | Y62F5A.3 | ||||||||
Y62F5A.3a | |||||||||
Y62F5A.3b | |||||||||
Other_name | cel-mir-36 | Remark | miRBase V21 import | ||||||
Cel-Mir-36-P2 | Remark | MirGeneDB 2.1 import | |||||||
CELE_Y62F5A.3 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | mir-36 | ||||||||
DB_info | Database | miRBase | acc | MI0000007 | |||||
SignaLink | mirna | cel-mir-36 | |||||||
MirGeneDB | cel | Cel-Mir-36-P2 | |||||||
NDB | locus_tag | CELE_Y62F5A.3 | |||||||
NCBI | gene | 260179 | |||||||
RefSeq | protein | NR_000922.2 | |||||||
RNAcentral | URSid | URS0000031682 | |||||||
URS000055D8AB | |||||||||
URS0000597516 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001265 | |||||||
Gene_class | mir | ||||||||
Allele | WBVar01499702 | ||||||||
WBVar01498604 | |||||||||
WBVar01498613 | |||||||||
WBVar01498435 | |||||||||
WBVar00769677 | |||||||||
WBVar00769678 | |||||||||
WBVar00145669 | |||||||||
WBVar00323158 | |||||||||
WBVar01498941 | |||||||||
In_cluster | MIR-36 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00106236 | ||||||||
00106237 | |||||||||
Structured_description | Concise_description | mir-36 encodes a microRNA, a small non-protein coding RNA that belongs to a large group of microRNAs that include the stRNAs, lin-4 and let-7; the mir-35 genomic cluster of microRNAs consists of seven genes, that are similar in sequence, mir-35-mir-41; this group of microRNAs functions redundantly to control embryonic development and is expressed only during embryogenesis and in young adults with eggs. | Paper_evidence | WBPaper00004972 | |||||
WBPaper00010853 | |||||||||
Curator_confirmed | WBPerson324 | ||||||||
Date_last_updated | 07 Feb 2005 00:00:00 | ||||||||
Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in RNA destabilization. Expressed in germ line. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_transcript | Y62F5A.3 | |||||||
Y62F5A.3a | |||||||||
Y62F5A.3b | |||||||||
Other_sequence | AJ487560 | ||||||||
Experimental_info | Expr_pattern | Expr1654 | |||||||
Expr2531 | |||||||||
Expr10898 | |||||||||
Expression_cluster (25) | |||||||||
Interaction | WBInteraction000520823 | ||||||||
WBInteraction000525411 | |||||||||
WBInteraction000541193 | |||||||||
WBInteraction000541255 | |||||||||
WBInteraction000541256 | |||||||||
WBInteraction000541258 | |||||||||
WBInteraction000541259 | |||||||||
WBInteraction000542240 | |||||||||
WBInteraction000550022 | |||||||||
WBInteraction000504912 | |||||||||
Map_info | Map | II | Position | 3.64651 | Error | 0.005883 | |||
Positive | Inside_rearr | nDf50 | |||||||
Positive_clone | Y62F5A | Inferred_automatically | From CDS info | ||||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Pos_neg_data | 10915 | |||||||
Pseudo_map_position | |||||||||
Reference (14) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |