WormBase Tree Display for Gene: WBGene00022855
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| WBGene00022855 | SMap | S_parent | Sequence | ZK1127 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | tcer | ||||||
| Allele (47) | |||||||
| Strain | WBStrain00004897 | ||||||
| WBStrain00004899 | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00083443 | ||||||
| 00083444 | |||||||
| 00083445 | |||||||
| 00087975 | |||||||
| 00087976 | |||||||
| 00126826 | |||||||
| Ortholog (39) | |||||||
| Paralog | WBGene00022853 | Caenorhabditis elegans | From_analysis | Panther | |||
| Structured_description | Automated_description | Predicted to enable RNA polymerase binding activity and transcription coregulator activity. Predicted to be involved in regulation of DNA-templated transcription. Located in nuclear periphery. Expressed in several structures, including germ cell; gonad; hypodermal cell; intestinal cell; and somatic cell. Is an ortholog of human TCERG1 (transcription elongation regulator 1). | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | ZK1127.9a | |||||
| ZK1127.9b | |||||||
| ZK1127.9c | |||||||
| ZK1127.9d | |||||||
| Corresponding_CDS_history | ZK1127.9e:wp274 | ||||||
| Corresponding_transcript | ZK1127.9a.1 | ||||||
| ZK1127.9b.1 | |||||||
| ZK1127.9c.1 | |||||||
| ZK1127.9c.2 | |||||||
| ZK1127.9c.3 | |||||||
| ZK1127.9c.4 | |||||||
| ZK1127.9d.1 | |||||||
| Other_sequence (61) | |||||||
| Associated_feature | WBsf650203 | ||||||
| WBsf223279 | |||||||
| Experimental_info | RNAi_result (33) | ||||||
| Expr_pattern | Expr7190 | ||||||
| Expr10747 | |||||||
| Expr12818 | |||||||
| Expr1040111 | |||||||
| Expr1162561 | |||||||
| Expr2017362 | |||||||
| Expr2035499 | |||||||
| Drives_construct (11) | |||||||
| Construct_product | WBCnstr00006528 | ||||||
| WBCnstr00006529 | |||||||
| WBCnstr00006530 | |||||||
| WBCnstr00006531 | |||||||
| WBCnstr00006533 | |||||||
| WBCnstr00006534 | |||||||
| WBCnstr00006535 | |||||||
| WBCnstr00006536 | |||||||
| WBCnstr00017522 | |||||||
| WBCnstr00021227 | |||||||
| WBCnstr00021228 | |||||||
| WBCnstr00023918 | |||||||
| Regulate_expr_cluster | WBPaper00049217:TCER-1_downregulated | ||||||
| WBPaper00049217:TCER-1_upregulated | |||||||
| Antibody | WBAntibody00001520 | ||||||
| Microarray_results (21) | |||||||
| Expression_cluster (92) | |||||||
| Interaction (40) | |||||||
| Map_info | Map | II | Position | 0.349925 | Error | 0.00503 | |
| Positive | Positive_clone | ZK1127 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference (28) | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
