WormBase Tree Display for Gene: WBGene00013580
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WBGene00013580 | SMap | S_parent | Sequence | Y79H2A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y79H2A.3 | |||||||
Molecular_name (21) | |||||||||
Other_name | CELE_Y79H2A.3 | Accession_evidence | NDB | BX284603 | |||||
Public_name | Y79H2A.3 | ||||||||
DB_info | Database (10) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (640) | |||||||||
Strain | WBStrain00037559 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00023600 | ||||||||
Contained_in_operon | CEOP3750 | ||||||||
Ortholog (35) | |||||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in ABalppappa; ABarappppa; germ line; intestine; and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including dpy-10; hsf-1; and sir-2.1 based on microarray; RNA-seq; and proteomic studies. Is affected by eight chemicals including rotenone; metformin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y79H2A.3a | |||||||
Y79H2A.3b | |||||||||
Y79H2A.3c | |||||||||
Y79H2A.3d | |||||||||
Y79H2A.3e | |||||||||
Y79H2A.3f | |||||||||
Y79H2A.3g | |||||||||
Corresponding_CDS_history | Y79H2A.3a:wp200 | ||||||||
Y79H2A.3b:wp200 | |||||||||
Corresponding_transcript | Y79H2A.3a.1 | ||||||||
Y79H2A.3b.1 | |||||||||
Y79H2A.3c.1 | |||||||||
Y79H2A.3d.1 | |||||||||
Y79H2A.3e.1 | |||||||||
Y79H2A.3f.1 | |||||||||
Y79H2A.3g.1 | |||||||||
Other_sequence (28) | |||||||||
Associated_feature | WBsf667488 | ||||||||
WBsf667489 | |||||||||
WBsf667490 | |||||||||
WBsf667491 | |||||||||
WBsf994556 | |||||||||
WBsf994557 | |||||||||
WBsf994558 | |||||||||
WBsf994559 | |||||||||
WBsf994560 | |||||||||
WBsf994561 | |||||||||
WBsf1016130 | |||||||||
WBsf1016131 | |||||||||
WBsf1016132 | |||||||||
WBsf1016133 | |||||||||
WBsf227626 | |||||||||
Transcription_factor | WBTranscriptionFactor000868 | ||||||||
Experimental_info | RNAi_result | WBRNAi00012278 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012279 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071371 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027547 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00058527 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00021498 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00026966 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006846 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1013237 | ||||||||
Expr1036071 | |||||||||
Expr1161933 | |||||||||
Expr2008445 | |||||||||
Expr2026686 | |||||||||
Microarray_results (35) | |||||||||
Expression_cluster (90) | |||||||||
Interaction | WBInteraction000420760 | ||||||||
WBInteraction000533606 | |||||||||
WBInteraction000533671 | |||||||||
WBInteraction000546296 | |||||||||
WBInteraction000557786 | |||||||||
WBInteraction000570408 | |||||||||
WBInteraction000575141 | |||||||||
WBInteraction000576720 | |||||||||
Map_info | Positive | Positive_clone | Y79H2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 14.1459 | |||||||
Method | Gene |