WormBase Tree Display for Gene: WBGene00008366
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WBGene00008366 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tpra-1 | Person_evidence | WBPerson625 | |||||
WBPerson567 | |||||||||
WBPerson2812 | |||||||||
Sequence_name | D1046.5 | ||||||||
Molecular_name | D1046.5a | ||||||||
D1046.5a.1 | |||||||||
CE32845 | |||||||||
D1046.5b | |||||||||
CE44691 | |||||||||
D1046.5b.1 | |||||||||
Other_name | CELE_D1046.5 | Accession_evidence | NDB | BX284604 | |||||
Public_name | tpra-1 | ||||||||
DB_info | Database | AceView | gene | 4J731 | |||||
WormQTL | gene | WBGene00008366 | |||||||
WormFlux | gene | WBGene00008366 | |||||||
NDB | locus_tag | CELE_D1046.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008366|UniProtKB=Q18936 | |||||||
family | PTHR15876 | ||||||||
NCBI | gene | 259586 | |||||||
RefSeq | protein | NM_001268429.3 | |||||||
NM_001268428.2 | |||||||||
SwissProt | UniProtAcc | Q18936 | |||||||
TREEFAM | TREEFAM_ID | TF314072 | |||||||
UniProt_GCRP | UniProtAcc | Q18936 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 21 Dec 2010 14:15:52 | WBPerson2970 | Name_change | CGC_name | tpra-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tpra | ||||||||
Allele (119) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00062870 | ||||||||
00062871 | |||||||||
00062872 | |||||||||
00062873 | |||||||||
00062874 | |||||||||
Ortholog (34) | |||||||||
Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Expressed in head neurons and tail. Is an ortholog of human TPRA1 (transmembrane protein adipocyte associated 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | D1046.5a | |||||||
D1046.5b | |||||||||
Corresponding_CDS_history | D1046.5:wp92 | ||||||||
Corresponding_transcript | D1046.5a.1 | ||||||||
D1046.5b.1 | |||||||||
Other_sequence | HCC07463_1 | ||||||||
FC554711.1 | |||||||||
CJC07875_1 | |||||||||
FC546374.1 | |||||||||
EX541643.1 | |||||||||
Oden_isotig18580 | |||||||||
ACC10637_1 | |||||||||
EX541432.1 | |||||||||
HC05642 | |||||||||
Acan_isotig06072 | |||||||||
Associated_feature | WBsf660459 | ||||||||
WBsf660460 | |||||||||
WBsf660461 | |||||||||
WBsf718149 | |||||||||
WBsf718150 | |||||||||
WBsf997319 | |||||||||
WBsf997320 | |||||||||
WBsf997321 | |||||||||
WBsf997322 | |||||||||
WBsf997323 | |||||||||
WBsf997324 | |||||||||
WBsf997325 | |||||||||
WBsf997326 | |||||||||
WBsf1017901 | |||||||||
WBsf1017902 | |||||||||
WBsf1017903 | |||||||||
WBsf1017904 | |||||||||
WBsf1017905 | |||||||||
WBsf1017906 | |||||||||
WBsf228768 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012523 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043380 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092876 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr3889 | ||||||||
Expr1014131 | |||||||||
Expr1033625 | |||||||||
Expr1147365 | |||||||||
Expr2017469 | |||||||||
Expr2035608 | |||||||||
Drives_construct | WBCnstr00011721 | ||||||||
WBCnstr00018440 | |||||||||
WBCnstr00033022 | |||||||||
Construct_product | WBCnstr00033022 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (189) | |||||||||
Interaction (11) | |||||||||
Map_info | Map | IV | Position | 3.99986 | Error | 2.8e-05 | |||
Positive | Positive_clone | D1046 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00041549 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |