WormBase Tree Display for Gene: WBGene00016957

WBGene00016957 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 2
    Name: CGC_name: atic-1 Person_evidence: WBPerson10610
      Sequence_name: C55F2.1
      Molecular_name: C55F2.1a
        C55F2.1a.1
        CE49563
        C55F2.1b
        CE37714
        C55F2.1c
        CE49487
        C55F2.1a.2
        C55F2.1b.1
        C55F2.1c.1
      Other_name: CELE_C55F2.1 Accession_evidence: NDB BX284604
      Public_name: atic-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 27 Jun 2014 15:53:55 WBPerson2970 Name_change: CGC_name: atic-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atic
    Allele (192)
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog (41)
    Structured_description: Automated_description: Predicted to enable IMP cyclohydrolase activity and phosphoribosylaminoimidazolecarboxamide formyltransferase activity. Predicted to be involved in 'de novo' IMP biosynthetic process. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in purine-pyrimidine metabolic disorder. Is an ortholog of human ATIC (5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:653 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:794)
  Molecular_info: Corresponding_CDS: C55F2.1a
      C55F2.1b
      C55F2.1c
    Corresponding_CDS_history: C55F2.1a:wp96
      C55F2.1a:wp241
      C55F2.1b:wp82
      C55F2.1b:wp134
      C55F2.1c:wp241
    Corresponding_transcript: C55F2.1a.1
      C55F2.1a.2
      C55F2.1b.1
      C55F2.1c.1
    Other_sequence: Dviv_isotig08048
      FK806094.1
      Dviv_isotig08049
      EW741776.1
      ASC20587_1
      Oden_isotig08431
      Acan_isotig08560
      OOC02720_1
      OOC02755_1
      XI01516
      Oden_isotig08432
      BXC01544_1
      AS06919
      Oden_isotig08435
      AS09596
      FF679863.1
      Oden_isotig23940
      Hbac_isotig01119
      TMC05075_1
      XIC00275_1
      TM03619
      GR13277
      EX910503.1
      HC01762
      BXC07022_1
      Dviv_isotig08053
      HBC08392_1
      HC06217
      EX014441.1
      ES743035.1
      FK800187.1
      Oden_isotig08436
      Tcir_isotig04078
      JO468342.1
      Oden_isotig08430
      Tcir_isotig10446
      ES412592.1
      FF679444.1
      HCC03027_1
      EX563350.1
      ASC20076_1
      FE909880.1
      EW741263.1
      Oden_isotig08429
      Dviv_isotig08052
      HC02065
      HCC03027_2
      CBC04302_1
      EX552935.1
      EX916818.1
      ES739169.1
      AYC03780_1
      FE912521.1
      Tcir_isotig24542
      DAC01901_1
      HBC02245_1
      HBC01416_1
      EX007455.1
      AE01574
      HC02090
      ACC14191_1
      SC01283
      FF679799.1
      HCC03027_3
      JI180510.1
      GR978233.1
      Dviv_isotig08051
      GP01049
      AE04781
      Oden_isotig08433
      ES744113.1
      Dviv_isotig08050
      AYC00187_1
      GRC02436_1
      Tcir_isotig13627
      FK805474.1
      ES413511.1
      JI168947.1
      FK804658.1
      CJC02310_1
      Oden_isotig08434
      EX010314.1
    Associated_feature: WBsf646122
      WBsf646123
      WBsf659836
      WBsf660337
      WBsf660338
      WBsf660339
      WBsf997068
      WBsf997069
      WBsf997070
      WBsf997071
      WBsf997072
      WBsf1017770
      WBsf1017771
      WBsf228589
      WBsf228590
      WBsf228591
  Experimental_info: RNAi_result: WBRNAi00030188 Inferred_automatically: RNAi_primary
      WBRNAi00002195 Inferred_automatically: RNAi_primary
      WBRNAi00043246 Inferred_automatically: RNAi_primary
      WBRNAi00043245 Inferred_automatically: RNAi_primary
      WBRNAi00012169 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021399
      Expr1147227
      Expr2009504
      Expr2027741
    Drives_construct: WBCnstr00027680
    Construct_product: WBCnstr00027680
    Microarray_results (38)
    Expression_cluster (284)
    Interaction (42)
  Map_info: Map: IV Position: 3.49542
    Positive: Positive_clone: C55F2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00032322
    WBPaper00038491
    WBPaper00047809
    WBPaper00051752
    WBPaper00053669
    WBPaper00055090
    WBPaper00057506
    WBPaper00063976
    WBPaper00064989
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene