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WormBase Tree Display for Gene: WBGene00012825

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Name Class

WBGene00012825SMapS_parentSequenceY43F8C
IdentityVersion1
NameSequence_nameY43F8C.3
Molecular_nameY43F8C.3
Y43F8C.3.1
CE39836
Other_nameCELE_Y43F8C.3Accession_evidenceNDBBX284605
Public_nameY43F8C.3
DB_infoDatabaseAceViewgene5U90
WormQTLgeneWBGene00012825
WormFluxgeneWBGene00012825
NDBlocus_tagCELE_Y43F8C.3
PanthergeneCAEEL|WormBase=WBGene00012825|UniProtKB=Q9XWN3
familyPTHR22744
NCBIgene180282
RefSeqproteinNM_075402.7
TrEMBLUniProtAccQ9XWN3
UniProt_GCRPUniProtAccQ9XWN3
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (230)
RNASeq_FPKM (74)
OrthologWBGene00028089Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00065961Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00164380Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00214335Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00206607Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00222201Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9418Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g13334Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5714Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19175Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14352Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9551Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g15088Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1938Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9177Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1952Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00246.g7812Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00443.g10913Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-Y43F8C.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21908Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00469.g11784Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14273Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_16637Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_021759Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g2692Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50408200Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g17925Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00247035Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00091340Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00256306Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (25)
Structured_descriptionAutomated_descriptionEnriched in intestine; male-specific anatomical entity; neurons; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including 1-methylnicotinamide; Tunicamycin; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY43F8C.3
Corresponding_CDS_historyY43F8C.3:wp154
Corresponding_transcriptY43F8C.3.1
Other_sequence (11)
Associated_featureWBsf653582
WBsf669867
WBsf669868
WBsf669869
WBsf1003317
WBsf1003318
WBsf1003319
WBsf1003320
WBsf1021788
WBsf1021789
WBsf1021790
Experimental_infoRNAi_resultWBRNAi00019972Inferred_automaticallyRNAi_primary
WBRNAi00007352Inferred_automaticallyRNAi_primary
WBRNAi00020568Inferred_automaticallyRNAi_primary
WBRNAi00019974Inferred_automaticallyRNAi_primary
WBRNAi00098164Inferred_automaticallyRNAi_primary
WBRNAi00020567Inferred_automaticallyRNAi_primary
WBRNAi00056528Inferred_automaticallyRNAi_primary
WBRNAi00037062Inferred_automaticallyRNAi_primary
Expr_patternExpr1024859
Expr1035673
Expr1160005
Expr2007519
Expr2025756
Microarray_results (24)
Expression_cluster (191)
Interaction (92)
Map_infoPositivePositive_cloneY43F8CInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV22.5729
MethodGene