WormBase Tree Display for Gene: WBGene00003651
expand all nodes | collapse all nodes | view schema
WBGene00003651 | Evidence | Paper_evidence | WBPaper00003416 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | W01D2 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | nhr-61 | Person_evidence | WBPerson600 | |||||
Sequence_name | W01D2.2 | ||||||||
Molecular_name (12) | |||||||||
Other_name | CELE_W01D2.2 | Accession_evidence | NDB | BX284602 | |||||
Public_name | nhr-61 | ||||||||
DB_info | Database | AceView | gene | 2P102 | |||||
WormQTL | gene | WBGene00003651 | |||||||
WormFlux | gene | WBGene00003651 | |||||||
NDB | locus_tag | CELE_W01D2.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003651|UniProtKB=O62389 | |||||||
family | PTHR47630 | ||||||||
NCBI | gene | 175142 | |||||||
RefSeq | protein | NM_001306648.3 | |||||||
NM_001306649.3 | |||||||||
NM_001027211.6 | |||||||||
NM_001027210.8 | |||||||||
SwissProt | UniProtAcc | O62389 | |||||||
TREEFAM | TREEFAM_ID | TF315528 | |||||||
TrEMBL | UniProtAcc | U4PC05 | |||||||
U4PMG4 | |||||||||
UniProt_GCRP | UniProtAcc | O62389 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (51) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00037811 | ||||||||
00037812 | |||||||||
00037813 | |||||||||
00037814 | |||||||||
00111410 | |||||||||
00111411 | |||||||||
00111412 | |||||||||
00111413 | |||||||||
Ortholog (25) | |||||||||
Paralog (216) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W01D2.2a | |||||||
W01D2.2b | |||||||||
W01D2.2c | |||||||||
W01D2.2d | |||||||||
Corresponding_transcript | W01D2.2a.1 | ||||||||
W01D2.2b.1 | |||||||||
W01D2.2c.1 | |||||||||
W01D2.2d.1 | |||||||||
Other_sequence | CBC11329_1 | ||||||||
CRC10387_1 | |||||||||
CR00295 | |||||||||
HBC21573_1 | |||||||||
FD514887.1 | |||||||||
CSC01266_1 | |||||||||
CR10767 | |||||||||
CBC08583_1 | |||||||||
CRC04906_1 | |||||||||
EX910075.1 | |||||||||
Associated_feature | WBsf666403 | ||||||||
WBsf666404 | |||||||||
WBsf666405 | |||||||||
WBsf666406 | |||||||||
WBsf666407 | |||||||||
WBsf666408 | |||||||||
WBsf666409 | |||||||||
WBsf990826 | |||||||||
WBsf990827 | |||||||||
WBsf990828 | |||||||||
WBsf990829 | |||||||||
WBsf990830 | |||||||||
WBsf990831 | |||||||||
WBsf990832 | |||||||||
WBsf990833 | |||||||||
WBsf990834 | |||||||||
WBsf990835 | |||||||||
WBsf990836 | |||||||||
WBsf990837 | |||||||||
WBsf1013909 | |||||||||
WBsf1013910 | |||||||||
WBsf1013911 | |||||||||
WBsf1013912 | |||||||||
WBsf1013913 | |||||||||
WBsf1013914 | |||||||||
WBsf224308 | |||||||||
WBsf224309 | |||||||||
Transcription_factor | WBTranscriptionFactor000344 | ||||||||
Experimental_info | RNAi_result (17) | ||||||||
Expr_pattern | Expr1012033 | ||||||||
Expr1031692 | |||||||||
Expr1158069 | |||||||||
Expr2014212 | |||||||||
Expr2032453 | |||||||||
Microarray_results (35) | |||||||||
Expression_cluster (143) | |||||||||
Interaction | WBInteraction000031338 | ||||||||
WBInteraction000511497 | |||||||||
WBInteraction000525704 | |||||||||
WBInteraction000526920 | |||||||||
WBInteraction000534427 | |||||||||
Map_info | Map | II | Position | 23.5414 | Error | 0.019348 | |||
Positive | Positive_clone | W01D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4193 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027309 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |