WormBase Tree Display for Gene: WBGene00021496

WBGene00021496 SMap: S_parent: Sequence: Y40C5A
  Identity: Version: 2
    Name: CGC_name: daf-42 Person_evidence: WBPerson360
            WBPerson31239
      Sequence_name: Y40C5A.3
      Molecular_name (51)
      Other_name: CELE_Y40C5A.3 Accession_evidence: NDB BX284604
      Public_name: daf-42
    DB_info: Database: AceView gene 4I100
        WormQTL gene WBGene00021496
        WormFlux gene WBGene00021496
        NDB locus_tag CELE_Y40C5A.3
        NCBI gene 177507
        RefSeq protein (17)
        TREEFAM TREEFAM_ID TF342754
        TrEMBL UniProtAcc (17)
        UniProt_GCRP UniProtAcc W6RTL3
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 May 2019 14:10:26 WBPerson1983 Name_change: CGC_name: daf-42
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: daf
    Allele: WBVar00260213
      WBVar00920840
      WBVar00920841
      WBVar00920842
      WBVar00920843
      WBVar00920844
      WBVar00920845
      WBVar00920846
      WBVar00920847
      WBVar00920848
      WBVar00920849
      WBVar00920850
      WBVar00920851
      WBVar00920852
      WBVar00920853
      WBVar00920854
      WBVar00920855
      WBVar00920856
      WBVar01729815
      WBVar01729816
      WBVar00920857
      WBVar00920858
      WBVar00920859
      WBVar00920860
      WBVar00920861
      WBVar01650024
      WBVar00920862
      WBVar00142092
      WBVar00920863
      WBVar00920864
      WBVar00920865
      WBVar00920866
      WBVar00920867
      WBVar00920868
      WBVar00920869
      WBVar00920870
      WBVar00920871
      WBVar00920872
      WBVar00920873
      WBVar00920874
      WBVar00920875
      WBVar00920876
      WBVar00920877
      WBVar00920878
      WBVar00920879
      WBVar00920880
      WBVar00920881
      WBVar00920882
      WBVar00920883
      WBVar00920884
      WBVar00920885
      WBVar00920886
      WBVar00920887
      WBVar00920888
      WBVar00920889
      WBVar01499395
      WBVar00920890
      WBVar01499396
      WBVar00920891
      WBVar00920892
      WBVar00920893
      WBVar00920894
      WBVar02082390
      WBVar00920895
      WBVar00920896
      WBVar00920897
      WBVar00920898
      WBVar00920899
      WBVar01453067
      WBVar00428549
      WBVar01453068
      WBVar00920900
      WBVar01453069
      WBVar00428550
      WBVar00920901
      WBVar01453071
      WBVar00428551
      WBVar00920902
      WBVar01453072
      WBVar00428552
      WBVar00920903
      WBVar00428553
      WBVar00920904
      WBVar02134145
      WBVar00920905
      WBVar02134146
      WBVar00428554
      WBVar00428555
      WBVar00920906
      WBVar00428556
      WBVar00920907
      WBVar00428557
      WBVar02152241
      WBVar00920908
      WBVar00428558
      WBVar00920909
      WBVar00920910
      WBVar00428559
      WBVar00428560
      WBVar00920911
      WBVar00920912
      WBVar00428561
      WBVar00428562
      WBVar00920913
      WBVar00920914
      WBVar00428563
      WBVar00920915
      WBVar00428564
      WBVar00920916
      WBVar00428565
      WBVar00920917
      WBVar00428566
      WBVar00920918
      WBVar00428567
      WBVar00920919
      WBVar00428568
      WBVar00428569
      WBVar00920920
      WBVar00428570
      WBVar00920921
      WBVar00920922
      WBVar00428571
      WBVar00920923
      WBVar01786424
      WBVar00428572
      WBVar00920924
      WBVar00428573
      WBVar00920925
      WBVar00428574
      WBVar00428575
      WBVar00920926
      WBVar00428576
      WBVar00052892
      WBVar00428577
      WBVar01710257
      WBVar01894124
      WBVar01499633
      WBVar01997343
      WBVar00261812
      WBVar02118349
      WBVar00265881
      WBVar01500245
    RNASeq_FPKM (74)
    Ortholog (19)
    Structured_description: Automated_description: Enriched in several structures, including ABalaappppa; ABalapaappa; ABalapapapa; ABalapappaa; and anterior ganglion (post) based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by four chemicals including Zidovudine; sucrose; and stearic acid based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (5)
  Experimental_info: RNAi_result: WBRNAi00020449 Inferred_automatically: RNAi_primary
      WBRNAi00020450 Inferred_automatically: RNAi_primary
      WBRNAi00020451 Inferred_automatically: RNAi_primary
      WBRNAi00056325 Inferred_automatically: RNAi_primary
      WBRNAi00020447 Inferred_automatically: RNAi_primary
      WBRNAi00059962 Inferred_automatically: RNAi_primary
      WBRNAi00059961 Inferred_automatically: RNAi_primary
      WBRNAi00059963 Inferred_automatically: RNAi_primary
      WBRNAi00020446 Inferred_automatically: RNAi_primary
      WBRNAi00059964 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr16428
      Expr1024795
      Expr1039394
      Expr1159813
      Expr2007417
      Expr2025653
    Drives_construct: WBCnstr00043013
    Construct_product: WBCnstr00043013
    Microarray_results (17)
    Expression_cluster (108)
  Map_info: Map: IV Position: 3.32865
    Positive: Positive_clone: Y40C5A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00057489
    WBPaper00062835
    WBPaper00065378
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene