WormBase Tree Display for Gene: WBGene00021476

WBGene00021476 SMap: S_parent: Sequence: Y39G10AR
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: nsun
    Allele: WBVar01704612
      WBVar00233230
      WBVar02016159
      WBVar02016160
      WBVar00601289
      WBVar01499559
      WBVar01531345
      WBVar01430575
      WBVar02126562
      WBVar02126563
      WBVar01499786
      WBVar01788445
      WBVar00328110
      WBVar00328111
      WBVar00328112
      WBVar00328113
      WBVar01499985
      WBVar00328114
      WBVar00328115
      WBVar00328116
      WBVar00328117
      WBVar00619067
      WBVar00619068
      WBVar00619069
      WBVar00619070
      WBVar00619071
      WBVar00619072
      WBVar00619073
      WBVar00619074
      WBVar00619075
      WBVar00619076
      WBVar00619077
      WBVar00619078
      WBVar00619079
      WBVar00619080
      WBVar00619081
      WBVar00619082
      WBVar00619083
      WBVar00619084
      WBVar00619085
      WBVar00619086
      WBVar00619087
      WBVar00619088
      WBVar00619089
      WBVar00619090
      WBVar00619091
      WBVar00097010
      WBVar00097011
      WBVar00150273
      WBVar01947922
      WBVar00150274
      WBVar01947923
      WBVar01947924
      WBVar01956269
      WBVar01279288
      WBVar01279291
      WBVar00023401
      WBVar01411209
      WBVar01411489
      WBVar00023406
      WBVar00023411
      WBVar02102544
      WBVar00023416
      WBVar02066317
    Strain: WBStrain00055506
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP1040
    Ortholog (34)
    Paralog: WBGene00021686 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: Y39G10AR.21 is orthologous to human NSUN4, a putative S-adenosyl-L-methionine-dependent methyl-transferase. Curator_confirmed: WBPerson324
            WBPerson1823
            WBPerson567
          Date_last_updated: 30 May 2012 00:00:00
      Automated_description: Enables rRNA (cytosine-C5-)-methyltransferase activity and tRNA (cytosine-5-)-methyltransferase activity. Predicted to be involved in rRNA methylation and tRNA methylation. Predicted to be located in mitochondrion. Is an ortholog of human NSUN4 (NOP2/Sun RNA methyltransferase 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y39G10AR.21a
      Y39G10AR.21b
      Y39G10AR.21c
    Corresponding_transcript: Y39G10AR.21a.1
      Y39G10AR.21b.1
      Y39G10AR.21c.1
    Other_sequence (36)
    Associated_feature: WBsf655767
      WBsf656061
      WBsf982844
      WBsf982845
      WBsf1009318
      WBsf217292
  Experimental_info: RNAi_result: WBRNAi00056274 Inferred_automatically: RNAi_primary
      WBRNAi00004599 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021465
      Expr1039387
      Expr1159756
      Expr2014504
      Expr2032743
    Drives_construct: WBCnstr00024538
    Construct_product: WBCnstr00024538
    Microarray_results (20)
    Expression_cluster (89)
    SAGE_tag: SAGE:acactccact Strand: Sense
        Unambiguously_mapped
      SAGE:acactccactgggagcc Strand: Sense
        Unambiguously_mapped
      SAGE:ggggtactgc Strand: Antisense
      SAGE:agatttcaaa Strand: Sense
        Unambiguously_mapped
      SAGE:gaaacgatagaggcctg Strand: Antisense
      SAGE:gaaacgatag Strand: Antisense
      SAGE:ggggtactgcataaata Strand: Antisense
      SAGE:cttaaccttt Strand: Antisense
    Interaction (62)
  Map_info: Positive: Positive_clone: Y39G10AR Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -9.42428
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00060731
    WBPaper00060738
  Method: Gene