WormBase Tree Display for Gene: WBGene00021000
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| WBGene00021000 | SMap | S_parent | Sequence | W03F9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W03F9.2 | |||||||
| Molecular_name | W03F9.2a | ||||||||
| W03F9.2a.1 | |||||||||
| CE14526 | |||||||||
| W03F9.2b | |||||||||
| Other_name | CELE_W03F9.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | W03F9.2 | ||||||||
| DB_info | Database | AceView | gene | 5A606 | |||||
| WormQTL | gene | WBGene00021000 | |||||||
| WormFlux | gene | WBGene00021000 | |||||||
| NDB | locus_tag | CELE_W03F9.2 | |||||||
| NCBI | gene | 178541 | |||||||
| RefSeq | protein | NR_132471.1 | |||||||
| NM_070738.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF343047 | |||||||
| TrEMBL | UniProtAcc | H2L0N7 | |||||||
| UniProt_GCRP | UniProtAcc | H2L0N7 | |||||||
| RNAcentral | URSid | URS00008578B1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499528 | ||||||||
| WBVar01499167 | |||||||||
| WBVar00252865 | |||||||||
| WBVar01499740 | |||||||||
| WBVar01495342 | |||||||||
| WBVar01457325 | |||||||||
| WBVar01457326 | |||||||||
| WBVar01499775 | |||||||||
| WBVar01499052 | |||||||||
| WBVar02031286 | |||||||||
| WBVar00977272 | |||||||||
| WBVar00977273 | |||||||||
| WBVar00977274 | |||||||||
| WBVar00977275 | |||||||||
| WBVar00977276 | |||||||||
| WBVar00977277 | |||||||||
| WBVar00977278 | |||||||||
| WBVar00977279 | |||||||||
| WBVar00977280 | |||||||||
| WBVar00977281 | |||||||||
| WBVar00977282 | |||||||||
| WBVar00977283 | |||||||||
| WBVar00977284 | |||||||||
| WBVar00977285 | |||||||||
| WBVar00977286 | |||||||||
| WBVar00977287 | |||||||||
| WBVar00977288 | |||||||||
| WBVar01923896 | |||||||||
| WBVar00200577 | |||||||||
| WBVar00253184 | |||||||||
| WBVar01688726 | |||||||||
| WBVar00447044 | |||||||||
| WBVar01688727 | |||||||||
| WBVar00447045 | |||||||||
| WBVar00447046 | |||||||||
| WBVar01516493 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00023218 | ||||||||
| 00023219 | |||||||||
| Ortholog (18) | |||||||||
| Paralog | WBGene00043051 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalappaap; ABalppppppa; ABplpaaaaa; ABplpaaaap; and head mesodermal cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including rotenone; mianserin; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W03F9.2a | |||||||
| Corresponding_CDS_history | W03F9.2b:wp248 | ||||||||
| Corresponding_transcript | W03F9.2b | ||||||||
| W03F9.2a.1 | |||||||||
| Other_sequence | CR01367 | ||||||||
| CRC05817_1 | |||||||||
| Associated_feature | WBsf668700 | ||||||||
| WBsf978531 | |||||||||
| WBsf233237 | |||||||||
| WBsf233238 | |||||||||
| Gene_product_binds (13391) | |||||||||
| Transcription_factor | WBTranscriptionFactor000752 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00009248 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001942 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036240 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062055 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026471 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071513 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054708 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017404 | ||||||||
| Expr1039151 | |||||||||
| Expr1158246 | |||||||||
| Expr1200066 | |||||||||
| Expr2006736 | |||||||||
| Expr2024956 | |||||||||
| Drives_construct | WBCnstr00024736 | ||||||||
| Construct_product (2) | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction | WBInteraction000526111 | ||||||||
| WBInteraction000526163 | |||||||||
| WBInteraction000527649 | |||||||||
| WBInteraction000528064 | |||||||||
| WBInteraction000548618 | |||||||||
| WBInteraction000548727 | |||||||||
| Map_info | Positive | Positive_clone | W03F9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -20.0117 | |||||||
| Method | Gene |
