WormBase Tree Display for Gene: WBGene00019823
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| WBGene00019823 | SMap | S_parent | Sequence | R02D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fnta-1 | Person_evidence | WBPerson114 | |||||
| Sequence_name | R02D3.5 | ||||||||
| Molecular_name | R02D3.5 | ||||||||
| R02D3.5.1 | |||||||||
| CE18099 | |||||||||
| Other_name | CELE_R02D3.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | fnta-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 10 Sep 2008 16:37:04 | WBPerson2970 | Name_change | CGC_name | fnta-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fnta | ||||||||
| Allele | WBVar01646861 | ||||||||
| WBVar01646862 | |||||||||
| WBVar01607423 | |||||||||
| WBVar01607424 | |||||||||
| WBVar01499166 | |||||||||
| WBVar00879044 | |||||||||
| WBVar00879045 | |||||||||
| WBVar00879046 | |||||||||
| WBVar00879047 | |||||||||
| WBVar00879048 | |||||||||
| WBVar00879049 | |||||||||
| WBVar00879050 | |||||||||
| WBVar00879051 | |||||||||
| WBVar00879052 | |||||||||
| WBVar00879053 | |||||||||
| WBVar00879054 | |||||||||
| WBVar00879055 | |||||||||
| WBVar00879056 | |||||||||
| WBVar00879057 | |||||||||
| WBVar00879058 | |||||||||
| WBVar00879059 | |||||||||
| WBVar00879060 | |||||||||
| WBVar01499608 | |||||||||
| WBVar01852622 | |||||||||
| WBVar01509805 | |||||||||
| WBVar02048106 | |||||||||
| WBVar01702368 | |||||||||
| WBVar01828007 | |||||||||
| WBVar01823375 | |||||||||
| WBVar00091569 | |||||||||
| WBVar00414853 | |||||||||
| WBVar00414854 | |||||||||
| WBVar00414855 | |||||||||
| WBVar02133144 | |||||||||
| WBVar00414856 | |||||||||
| Strain | WBStrain00035533 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP4008 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00019778 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enables protein farnesyltransferase activity. Predicted to be located in cytoplasm. Predicted to be part of CAAX-protein geranylgeranyltransferase complex and protein farnesyltransferase complex. Is an ortholog of human FNTA (farnesyltransferase, CAAX box, alpha). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R02D3.5 | |||||||
| Corresponding_transcript | R02D3.5.1 | ||||||||
| Other_sequence (69) | |||||||||
| Associated_feature | WBsf651608 | ||||||||
| WBsf667695 | |||||||||
| WBsf995106 | |||||||||
| WBsf995107 | |||||||||
| WBsf1016523 | |||||||||
| WBsf1016524 | |||||||||
| WBsf229652 | |||||||||
| WBsf229653 | |||||||||
| WBsf229654 | |||||||||
| WBsf229655 | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr1019943 | ||||||||
| Expr1038590 | |||||||||
| Expr1154835 | |||||||||
| Expr2011863 | |||||||||
| Expr2030101 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | IV | Position | -26.794 | Error | 0.005927 | |||
| Positive | Positive_clone | R02D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035302 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064071 | |||||||||
| WBPaper00064972 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
