WormBase Tree Display for Gene: WBGene00019432
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WBGene00019432 | SMap | S_parent | Sequence | K06A5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | knl-2 | Paper_evidence | WBPaper00029157 | |||||
Person_evidence | WBPerson283 | ||||||||
Sequence_name | K06A5.4 | ||||||||
Molecular_name | K06A5.4 | ||||||||
K06A5.4.1 | |||||||||
CE26645 | |||||||||
Other_name | let-380 | Person_evidence | WBPerson533 | ||||||
CELE_K06A5.4 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | knl-2 | ||||||||
DB_info | Database | AceView | gene | 1H39 | |||||
WormQTL | gene | WBGene00019432 | |||||||
WormFlux | gene | WBGene00019432 | |||||||
NDB | locus_tag | CELE_K06A5.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019432|UniProtKB=O44548 | |||||||
family | PTHR16124 | ||||||||
NCBI | gene | 172350 | |||||||
RefSeq | protein | NM_001380547.1 | |||||||
SwissProt | UniProtAcc | O44548 | |||||||
TREEFAM | TREEFAM_ID | TF342996 | |||||||
UniProt_GCRP | UniProtAcc | O44548 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 04 Jun 2007 15:54:19 | WBPerson2970 | Name_change | CGC_name | knl-2 | ||||
3 | 02 Mar 2015 14:25:40 | WBPerson2970 | Event | Acquires_merge | WBGene00002600 | ||||
Name_change | Other_name | let-380 | |||||||
Acquires_merge | WBGene00002600 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | knl | ||||||||
Allele | WBVar00336301 | ||||||||
WBVar00336302 | |||||||||
WBVar00336303 | |||||||||
WBVar00336304 | |||||||||
WBVar00336305 | |||||||||
WBVar00336306 | |||||||||
WBVar00336307 | |||||||||
WBVar00336308 | |||||||||
WBVar00336309 | |||||||||
WBVar01499786 | |||||||||
WBVar00093119 | |||||||||
WBVar01499054 | |||||||||
WBVar02144735 | |||||||||
WBVar01909675 | |||||||||
WBVar01909676 | |||||||||
WBVar01909677 | |||||||||
WBVar00250753 | |||||||||
WBVar00643957 | |||||||||
WBVar00643958 | |||||||||
WBVar00643959 | |||||||||
WBVar00643960 | |||||||||
WBVar00643961 | |||||||||
WBVar00643962 | |||||||||
WBVar00643963 | |||||||||
WBVar00643964 | |||||||||
WBVar00643965 | |||||||||
WBVar00643966 | |||||||||
WBVar00643967 | |||||||||
WBVar00643968 | |||||||||
WBVar00643969 | |||||||||
WBVar00643970 | |||||||||
WBVar00643971 | |||||||||
WBVar00643972 | |||||||||
WBVar00643973 | |||||||||
WBVar00643974 | |||||||||
WBVar00643975 | |||||||||
WBVar00643976 | |||||||||
WBVar00643977 | |||||||||
WBVar00643978 | |||||||||
WBVar00643979 | |||||||||
WBVar00146411 | |||||||||
WBVar01498959 | |||||||||
Legacy_information (2) | |||||||||
Strain | WBStrain00023680 | ||||||||
WBStrain00036592 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (16) | |||||||||
Ortholog (19) | |||||||||
Structured_description | Automated_description | Predicted to be involved in cell division; chromosome segregation; and meiotic cell cycle. Located in kinetochore and nucleus. Is an ortholog of human MIS18BP1 (MIS18 binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K06A5.4 | |||||||
Corresponding_transcript | K06A5.4.1 | ||||||||
Other_sequence | CRC07009_1 | ||||||||
CBC05858_1 | |||||||||
CJC13524_1 | |||||||||
CRC01117_1 | |||||||||
CR02307 | |||||||||
CRC02642_1 | |||||||||
CJC04736_1 | |||||||||
CR03767 | |||||||||
Associated_feature (14) | |||||||||
Experimental_info | RNAi_result (24) | ||||||||
Expr_pattern | Expr8317 | ||||||||
Expr1015488 | |||||||||
Expr1038396 | |||||||||
Expr1153724 | |||||||||
Expr2012973 | |||||||||
Expr2031205 | |||||||||
Drives_construct | WBCnstr00008169 | ||||||||
WBCnstr00025841 | |||||||||
Construct_product | WBCnstr00000899 | ||||||||
WBCnstr00005352 | |||||||||
WBCnstr00008169 | |||||||||
WBCnstr00025841 | |||||||||
Antibody | WBAntibody00001236 | ||||||||
WBAntibody00002322 | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (187) | |||||||||
Interaction (55) | |||||||||
Map_info | Map | I | Position | 1.12496 | Error | 0.00299 | |||
Positive | Positive_clone | K06A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Negative | Negative_clone | C03F7 | |||||||
C29F10 | |||||||||
C32G12 | |||||||||
C40A4 | |||||||||
C48E7 | |||||||||
K04F10 | |||||||||
ZC338 | |||||||||
Mapping_data | 2_point | 2544 | |||||||
Multi_point | 1030 | ||||||||
Pos_neg_data (14) | |||||||||
Pseudo_map_position | |||||||||
Reference (14) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
[McDowall JS] Extrachromosomal arrays containing two or three cosmids generated, then manipulated genetically. | |||||||||
Method | Gene |