WormBase Tree Display for Gene: WBGene00018680

WBGene00018680 SMap: S_parent: Sequence: F52C12
  Identity: Version: 2
    Name: CGC_name: tsen-54 Person_evidence: WBPerson236
      Sequence_name: F52C12.3
      Molecular_name: F52C12.3
        F52C12.3.1
        CE19436
      Other_name: CELE_F52C12.3 Accession_evidence: NDB BX284604
      Public_name: tsen-54
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 Nov 2014 11:51:19 WBPerson2970 Name_change: CGC_name: tsen-54
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tsen
    Allele: WBVar02117106
      WBVar01511918
      WBVar01511919
      WBVar01511920
      WBVar01511921
      WBVar02047075
      WBVar01511922
      WBVar02047076
      WBVar01511923
      WBVar01499166
      WBVar01511924
      WBVar01511925
      WBVar01511926
      WBVar01511927
      WBVar01511928
      WBVar01833263
      WBVar02050985
      WBVar01894057
      WBVar01894058
      WBVar00418415
      WBVar00418416
      WBVar00418417
      WBVar02133394
      WBVar00418418
      WBVar02133395
      WBVar00418419
      WBVar00418420
      WBVar00418421
      WBVar01838942
      WBVar01725820
      WBVar01609152
      WBVar01609153
      WBVar01609154
      WBVar01785867
      WBVar01771654
      WBVar02015295
      WBVar01921433
      WBVar00889990
      WBVar01921434
      WBVar02041774
      WBVar00889991
      WBVar01921435
      WBVar00889992
      WBVar02041775
      WBVar00308058
      WBVar01921436
      WBVar00889993
      WBVar00889994
      WBVar00889995
      WBVar00889996
      WBVar00889997
      WBVar00184723
      WBVar00889998
      WBVar00184724
      WBVar00889999
      WBVar01450994
      WBVar00890000
      WBVar00890001
      WBVar01964982
      WBVar00890002
      WBVar01964983
      WBVar00890003
      WBVar00890004
      WBVar00890005
      WBVar00890006
      WBVar00890007
      WBVar01499633
      WBVar00890008
      WBVar00890009
      WBVar00890010
      WBVar00890011
      WBVar00890012
      WBVar00890013
      WBVar01823508
      WBVar01823509
      WBVar00890014
      WBVar02074278
      WBVar00890015
      WBVar01823510
      WBVar01823511
      WBVar01823512
      WBVar02082081
      WBVar01823513
      WBVar01823514
      WBVar00569368
      WBVar01580036
      WBVar01913397
      WBVar01984897
      WBVar02008128
      WBVar02008129
      WBVar01648679
      WBVar01648680
      WBVar01648681
      WBVar01648682
      WBVar01687809
      WBVar01687810
      WBVar02112127
      WBVar01500062
      WBVar02048173
    RNASeq_FPKM (74)
    GO_annotation: 00097285
      00097286
      00097287
      00097288
    Contained_in_operon: CEOP4052
    Ortholog (24)
    Structured_description: Automated_description: Predicted to enable endonuclease activity. Predicted to be involved in tRNA-type intron splice site recognition and cleavage. Predicted to be part of tRNA-intron endonuclease complex. Human ortholog(s) of this gene implicated in pontocerebellar hypoplasia type 2A; pontocerebellar hypoplasia type 4; and pontocerebellar hypoplasia type 5. Is an ortholog of human TSEN54 (tRNA splicing endonuclease subunit 54). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model (3)
  Molecular_info: Corresponding_CDS: F52C12.3
    Corresponding_transcript: F52C12.3.1
    Other_sequence: HC08381
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00062258 Inferred_automatically: RNAi_primary
      WBRNAi00047928 Inferred_automatically: RNAi_primary
      WBRNAi00032588 Inferred_automatically: RNAi_primary
      WBRNAi00110855 Inferred_automatically: RNAi_primary
      WBRNAi00015370 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021893
      Expr1038041
      Expr1151757
      Expr2017535
      Expr2035673
    Microarray_results (19)
    Expression_cluster (84)
  Map_info: Positive: Positive_clone: F52C12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -12.7356
  Method: Gene