WormBase Tree Display for Gene: WBGene00018015
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| WBGene00018015 | SMap | S_parent | Sequence | F33G12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F33G12.3 | |||||||
| Molecular_name | F33G12.3 | ||||||||
| F33G12.3.1 | |||||||||
| CE04481 | |||||||||
| Other_name | CELE_F33G12.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F33G12.3 | ||||||||
| DB_info | Database | AceView | gene | 2F322 | |||||
| WormQTL | gene | WBGene00018015 | |||||||
| WormFlux | gene | WBGene00018015 | |||||||
| NDB | locus_tag | CELE_F33G12.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018015|UniProtKB=Q19987 | |||||||
| family | PTHR13379 | ||||||||
| NCBI | gene | 173868 | |||||||
| RefSeq | protein | NM_062526.9 | |||||||
| TREEFAM | TREEFAM_ID | TF105980 | |||||||
| TrEMBL | UniProtAcc | Q19987 | |||||||
| UniProt_GCRP | UniProtAcc | Q19987 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01499702 | ||||||||
| WBVar00103888 | |||||||||
| WBVar01498435 | |||||||||
| WBVar00238022 | |||||||||
| WBVar01934621 | |||||||||
| WBVar01393606 | |||||||||
| WBVar01559490 | |||||||||
| WBVar01559491 | |||||||||
| WBVar00171845 | |||||||||
| WBVar00223759 | |||||||||
| WBVar00729595 | |||||||||
| WBVar00729596 | |||||||||
| WBVar00729597 | |||||||||
| WBVar00729598 | |||||||||
| WBVar00729599 | |||||||||
| WBVar00729600 | |||||||||
| WBVar00729601 | |||||||||
| WBVar00729602 | |||||||||
| WBVar01626502 | |||||||||
| WBVar02148001 | |||||||||
| WBVar01626503 | |||||||||
| WBVar01949060 | |||||||||
| WBVar00365326 | |||||||||
| WBVar00365327 | |||||||||
| WBVar00365328 | |||||||||
| WBVar00365329 | |||||||||
| WBVar00365330 | |||||||||
| WBVar00365331 | |||||||||
| WBVar00365332 | |||||||||
| WBVar00254308 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2156 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including germ line; head mesodermal cell; mechanosensory neurons; rectal epithelial cell; and rectum based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; hsf-1; and eat-2 based on microarray; RNA-seq; and proteomic studies. Is affected by nine chemicals including Zidovudine; metformin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF1308; Domain of unknown function DUF5614; Protein of unknown function (DUF1308); Phosphorylation site; and Family of unknown function (DUF5614). Is an ortholog of human C7orf25 (chromosome 7 open reading frame 25). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F33G12.3 | |||||||
| Corresponding_transcript | F33G12.3.1 | ||||||||
| Other_sequence | CJC17277_1 | ||||||||
| CRC02835_1 | |||||||||
| CBC11220_1 | |||||||||
| CR01607 | |||||||||
| Associated_feature | WBsf987781 | ||||||||
| WBsf1012170 | |||||||||
| WBsf222988 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062234 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031726 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014253 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046222 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016586 | ||||||||
| Expr1037762 | |||||||||
| Expr1150109 | |||||||||
| Expr2003265 | |||||||||
| Expr2021478 | |||||||||
| Drives_construct | WBCnstr00026840 | ||||||||
| Construct_product | WBCnstr00026840 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction | WBInteraction000302170 | ||||||||
| WBInteraction000402752 | |||||||||
| WBInteraction000450264 | |||||||||
| WBInteraction000552249 | |||||||||
| Map_info | Positive | Positive_clone | F33G12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -2.58945 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
