WormBase Tree Display for Gene: WBGene00017772
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WBGene00017772 | SMap | S_parent | Sequence | F25B4 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-1 | Person_evidence | WBPerson260 | |||
Sequence_name | F25B4.9 | ||||||
Molecular_name | F25B4.9 | ||||||
F25B4.9.1 | |||||||
CE09627 | |||||||
Other_name | CELE_F25B4.9 | Accession_evidence | NDB | BX284605 | |||
Public_name | clec-1 | ||||||
DB_info | Database | AceView | gene | 5G181 | |||
WormQTL | gene | WBGene00017772 | |||||
WormFlux | gene | WBGene00017772 | |||||
NDB | locus_tag | CELE_F25B4.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017772|UniProtKB=Q22966 | |||||
family | PTHR22802 | ||||||
NCBI | gene | 178958 | |||||
RefSeq | protein | NM_072099.7 | |||||
TREEFAM | TREEFAM_ID | TF315317 | |||||
TrEMBL | UniProtAcc | Q22966 | |||||
UniProt_GCRP | UniProtAcc | Q22966 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele | WBVar01499528 | ||||||
WBVar01740300 | |||||||
WBVar01740301 | |||||||
WBVar01499740 | |||||||
WBVar00250297 | |||||||
WBVar01500129 | |||||||
WBVar00458952 | |||||||
WBVar01013775 | |||||||
WBVar01013776 | |||||||
WBVar01013777 | |||||||
WBVar01013778 | |||||||
WBVar01013779 | |||||||
WBVar01013780 | |||||||
WBVar01013781 | |||||||
WBVar01013782 | |||||||
WBVar01499496 | |||||||
WBVar00209657 | |||||||
WBVar01499316 | |||||||
WBVar01500066 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00076854 | ||||||
00076855 | |||||||
Ortholog (30) | |||||||
Paralog (26) | |||||||
Structured_description | Automated_description | Predicted to enable carbohydrate binding activity. Predicted to be located in external side of plasma membrane. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F25B4.9 | |||||
Corresponding_transcript | F25B4.9.1 | ||||||
Other_sequence (51) | |||||||
Associated_feature | WBsf661004 | ||||||
WBsf716813 | |||||||
WBsf1000066 | |||||||
WBsf1000067 | |||||||
WBsf1000068 | |||||||
WBsf1019672 | |||||||
WBsf1019673 | |||||||
WBsf1019674 | |||||||
WBsf1019675 | |||||||
WBsf231788 | |||||||
Experimental_info | RNAi_result (14) | ||||||
Expr_pattern | Expr1016205 | ||||||
Expr1037635 | |||||||
Expr1149391 | |||||||
Expr2010113 | |||||||
Expr2028356 | |||||||
Drives_construct | WBCnstr00027031 | ||||||
Construct_product | WBCnstr00027031 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (230) | |||||||
Interaction (167) | |||||||
Map_info | Map | V | Position | -1.19989 | Error | 0.020934 | |
Positive | Positive_clone | F25B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4505 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00030297 | ||||||
WBPaper00041082 | |||||||
WBPaper00061662 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |