WormBase Tree Display for Gene: WBGene00017519
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| WBGene00017519 | SMap | S_parent | Sequence | F16G10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hpo-25 | Paper_evidence | WBPaper00038231 | |||||
| Person_evidence | WBPerson26 | ||||||||
| Sequence_name | F16G10.4 | ||||||||
| Molecular_name | F16G10.4 | ||||||||
| F16G10.4.1 | |||||||||
| CE19393 | |||||||||
| Other_name | CELE_F16G10.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | hpo-25 | ||||||||
| DB_info | Database | AceView | gene | 2C659 | |||||
| WormQTL | gene | WBGene00017519 | |||||||
| WormFlux | gene | WBGene00017519 | |||||||
| NDB | locus_tag | CELE_F16G10.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017519|UniProtKB=O76588 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 184579 | |||||||
| RefSeq | protein | NM_061856.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322011 | |||||||
| TrEMBL | UniProtAcc | O76588 | |||||||
| UniProt_GCRP | UniProtAcc | O76588 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-25 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hpo | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar02123182 | |||||||||
| WBVar02121719 | |||||||||
| WBVar02123007 | |||||||||
| WBVar02121537 | |||||||||
| WBVar02122097 | |||||||||
| WBVar02121362 | |||||||||
| WBVar00359139 | |||||||||
| WBVar00359140 | |||||||||
| WBVar00359141 | |||||||||
| WBVar01500106 | |||||||||
| WBVar02122298 | |||||||||
| WBVar02124326 | |||||||||
| WBVar02121946 | |||||||||
| WBVar00711498 | |||||||||
| WBVar00711499 | |||||||||
| WBVar00711500 | |||||||||
| WBVar00711501 | |||||||||
| WBVar00711502 | |||||||||
| WBVar00711503 | |||||||||
| WBVar00711504 | |||||||||
| WBVar02122908 | |||||||||
| WBVar02124387 | |||||||||
| WBVar00091184 | |||||||||
| WBVar01817602 | |||||||||
| WBVar02122214 | |||||||||
| WBVar02122773 | |||||||||
| WBVar02121124 | |||||||||
| WBVar00100362 | |||||||||
| WBVar02122433 | |||||||||
| WBVar02123354 | |||||||||
| WBVar00091064 | |||||||||
| WBVar02124091 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00038533 | ||||||||
| Ortholog | WBGene00040996 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
| WBGene00040997 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| CBOVI.g1498 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CBOVI.g8057 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP38.g7933 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g3665 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (88) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16G10.4 | |||||||
| Corresponding_transcript | F16G10.4.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00013420 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044819 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088656 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088763 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018534 | ||||||||
| Expr1148783 | |||||||||
| Expr2012564 | |||||||||
| Expr2030801 | |||||||||
| Drives_construct | WBCnstr00027239 | ||||||||
| Construct_product | WBCnstr00027239 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (30) | |||||||||
| SAGE_tag | SAGE:tccagatttggcgaatt | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| Interaction (54) | |||||||||
| Map_info | Map | II | Position | -13.8308 | Error | 0.000632 | |||
| Positive | Positive_clone | F16G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
