WormBase Tree Display for Gene: WBGene00017497
expand all nodes | collapse all nodes | view schema
| WBGene00017497 | SMap | S_parent | Sequence | F15E11 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | irld | |||||
| Allele | WBVar01499528 | |||||
| WBVar02122641 | ||||||
| WBVar01499167 | ||||||
| WBVar01499537 | ||||||
| WBVar02123934 | ||||||
| WBVar01585445 | ||||||
| WBVar02122841 | ||||||
| WBVar00308193 | ||||||
| WBVar01499740 | ||||||
| WBVar01786552 | ||||||
| WBVar00452073 | ||||||
| WBVar02013551 | ||||||
| WBVar02123415 | ||||||
| WBVar00310153 | ||||||
| WBVar02121039 | ||||||
| WBVar00302148 | ||||||
| WBVar00305687 | ||||||
| WBVar00582310 | ||||||
| WBVar02121241 | ||||||
| WBVar02121460 | ||||||
| WBVar01612515 | ||||||
| WBVar02124610 | ||||||
| WBVar02124426 | ||||||
| WBVar00204480 | ||||||
| WBVar00204481 | ||||||
| WBVar01499496 | ||||||
| WBVar02124813 | ||||||
| WBVar01499316 | ||||||
| WBVar00992806 | ||||||
| WBVar00992807 | ||||||
| WBVar01497486 | ||||||
| WBVar01500066 | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (61) | ||||||
| Paralog (75) | ||||||
| Structured_description | Automated_description | Is affected by several genes including let-60; sir-2.1; and clk-1 based on tiling array; RNA-seq; and microarray studies. Is affected by Tunicamycin; resveratrol; and Sirolimus based on microarray studies. Is predicted to encode a protein with the following domains: Receptor L domain; Receptor L-domain; and Receptor L-domain superfamily. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | F15E11.11a | ||||
| F15E11.11b | ||||||
| F15E11.11c | ||||||
| Corresponding_CDS_history | F15E11.11:wp250 | |||||
| Corresponding_transcript | F15E11.11a.1 | |||||
| F15E11.11b.1 | ||||||
| F15E11.11c.1 | ||||||
| Experimental_info | RNAi_result | WBRNAi00044727 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00044726 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00044735 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00044728 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00013373 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1026603 | |||||
| Expr1148697 | ||||||
| Microarray_results (14) | ||||||
| Expression_cluster (34) | ||||||
| Interaction | WBInteraction000170901 | |||||
| WBInteraction000194137 | ||||||
| WBInteraction000211683 | ||||||
| WBInteraction000215317 | ||||||
| WBInteraction000331640 | ||||||
| WBInteraction000344734 | ||||||
| WBInteraction000400610 | ||||||
| WBInteraction000401253 | ||||||
| Map_info | Map | V | Position | -14.8667 | ||
| Positive | Positive_clone | F15E11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-14.8696) | ||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-14.8654) | ||||||
| Method | Gene |
