WormBase Tree Display for Gene: WBGene00017080

WBGene00017080 SMap: S_parent: Sequence: DC2
  Identity: Version: 2
    Name: CGC_name: lec-12 Paper_evidence: WBPaper00040257
      Sequence_name: DC2.3
      Molecular_name (21)
      Other_name: CELE_DC2.3 Accession_evidence: NDB BX284605
      Public_name: lec-12
    DB_info: Database: AceView gene 5A687
        WormQTL gene WBGene00017080
        WormFlux gene WBGene00017080
        NDB locus_tag CELE_DC2.3
        Panther gene CAEEL|WormBase=WBGene00017080|UniProtKB=Q5ZR27
          family PTHR11346
        NCBI gene 178548
        RefSeq protein NM_001028587.4
            NM_001313140.3
            NM_001313139.3
            NM_001028588.6
            NM_001313138.1
            NM_001313136.3
            NM_001313137.3
        TREEFAM TREEFAM_ID TF323681
        TrEMBL UniProtAcc A0A0K3AUS0
            A0A0K3AVE8
            A0A0K3ASC7
            A0A0K3ARW6
            H2KZJ9
            Q5ZR27
            A0A0K3AXP2
        UniProt_GCRP UniProtAcc Q5ZR27
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 13 Oct 2011 15:59:42 WBPerson2970 Name_change: CGC_name: lec-12
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lec
    Allele: WBVar01499528
      WBVar01499167
      WBVar01516534
      WBVar01516535
      WBVar00308185
      WBVar00200643
      WBVar00200644
      WBVar00200645
      WBVar00200646
      WBVar00200647
      WBVar01970439
      WBVar01970440
      WBVar00200648
      WBVar01499740
      WBVar01985151
      WBVar01985152
      WBVar01985153
      WBVar02022873
      WBVar02022874
      WBVar01688796
      WBVar01688797
      WBVar00598816
      WBVar01498840
      WBVar01772922
      WBVar01499775
      WBVar01772923
      WBVar02008596
      WBVar01772924
      WBVar02008597
      WBVar01772925
      WBVar00977805
      WBVar01772926
      WBVar00977806
      WBVar01772927
      WBVar00977807
      WBVar01772928
      WBVar01772929
      WBVar00977808
      WBVar00977809
      WBVar01772930
      WBVar01772931
      WBVar00977810
      WBVar00977811
      WBVar00977812
      WBVar00977813
      WBVar01499052
      WBVar00977814
      WBVar00977815
      WBVar02092715
      WBVar00977816
      WBVar00977817
      WBVar00977818
      WBVar00977819
      WBVar00977820
      WBVar00977821
      WBVar00977822
      WBVar00977823
      WBVar00977824
      WBVar00977825
      WBVar00977826
      WBVar00977827
      WBVar01650090
      WBVar00265271
      WBVar00977828
      WBVar00977829
      WBVar00977830
      WBVar00977831
      WBVar00977832
      WBVar00977833
      WBVar00977834
      WBVar00977835
      WBVar00977836
      WBVar00977837
      WBVar01457379
      WBVar00309155
      WBVar00977838
      WBVar00977839
      WBVar01457380
      WBVar00977840
      WBVar01457381
      WBVar01457382
      WBVar00977841
      WBVar00977842
      WBVar01457383
      WBVar01457384
      WBVar00977843
      WBVar00977844
      WBVar01457385
      WBVar00977845
      WBVar00977846
      WBVar00977847
      WBVar00977848
      WBVar00977849
      WBVar00977850
      WBVar00977851
      WBVar01894327
      WBVar00447208
      WBVar00447209
      WBVar01997375
      WBVar00447210
      WBVar01923929
      WBVar00447211
      WBVar00447212
      WBVar01609583
      WBVar01923930
      WBVar00447213
      WBVar00447214
      WBVar00447215
      WBVar00447216
      WBVar00447217
      WBVar01483297
      WBVar00447218
      WBVar00447219
      WBVar00447220
      WBVar00447221
      WBVar00447222
      WBVar02135524
      WBVar02031365
      WBVar01734929
      WBVar01734930
      WBVar02031366
      WBVar02031367
      WBVar02031368
    RNASeq_FPKM (74)
    GO_annotation: 00000872
      00000982
      00000983
      00022350
      00122562
    Contained_in_operon: CEOP5588
    Ortholog (45)
    Paralog (27)
    Structured_description: Automated_description: Predicted to enable galactoside binding activity. Predicted to be located in membrane. Is an ortholog of human LGALS4 (galectin 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (5)
  Experimental_info: RNAi_result: WBRNAi00000892 Inferred_automatically: RNAi_primary
      WBRNAi00043538 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022072
      Expr1037340
      Expr1147531
      Expr2013033
      Expr2031265
    Microarray_results (22)
    Expression_cluster (75)
    Interaction: WBInteraction000039136
      WBInteraction000043884
      WBInteraction000043889
      WBInteraction000043890
      WBInteraction000140055
      WBInteraction000440230
      WBInteraction000553241
  Map_info: Map: V Position: -20.01 Error: 6.3e-05
    Positive: Positive_clone: DC2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040257
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene