WormBase Tree Display for Gene: WBGene00015828
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| WBGene00015828 | SMap | S_parent | Sequence | C16C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | math-14 | Person_evidence | WBPerson655 | |||||
| Sequence_name | C16C4.4 | ||||||||
| Molecular_name | C16C4.4a | ||||||||
| C16C4.4a.1 | |||||||||
| CE08200 | |||||||||
| C16C4.4b | |||||||||
| CE34692 | |||||||||
| C16C4.4b.1 | |||||||||
| Other_name | CELE_C16C4.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | math-14 | ||||||||
| DB_info | Database | AceView | gene | 2C135 | |||||
| WormQTL | gene | WBGene00015828 | |||||||
| WormFlux | gene | WBGene00015828 | |||||||
| NDB | locus_tag | CELE_C16C4.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015828|UniProtKB=F3NWW3 | |||||||
| family | PTHR46308 | ||||||||
| NCBI | gene | 182658 | |||||||
| RefSeq | protein | NM_001267115.3 | |||||||
| NM_001267114.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF322050 | |||||||
| TrEMBL | UniProtAcc | H2KYT1 | |||||||
| F3NWW3 | |||||||||
| UniProt_GCRP | UniProtAcc | F3NWW3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-14 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | math | ||||||||
| Allele | WBVar01499702 | ||||||||
| WBVar02120604 | |||||||||
| WBVar02123182 | |||||||||
| WBVar02075086 | |||||||||
| WBVar02123007 | |||||||||
| WBVar02121537 | |||||||||
| WBVar02122097 | |||||||||
| WBVar01705190 | |||||||||
| WBVar00358040 | |||||||||
| WBVar00358041 | |||||||||
| WBVar01500106 | |||||||||
| WBVar00358042 | |||||||||
| WBVar00358043 | |||||||||
| WBVar02124326 | |||||||||
| WBVar02121946 | |||||||||
| WBVar02079806 | |||||||||
| WBVar01898360 | |||||||||
| WBVar00042606 | |||||||||
| WBVar02124543 | |||||||||
| WBVar00042611 | |||||||||
| WBVar02077026 | |||||||||
| WBVar02122524 | |||||||||
| WBVar01763311 | |||||||||
| WBVar01763312 | |||||||||
| WBVar02118126 | |||||||||
| WBVar01412761 | |||||||||
| WBVar02079843 | |||||||||
| WBVar02102853 | |||||||||
| WBVar02102854 | |||||||||
| WBVar00091181 | |||||||||
| WBVar02099196 | |||||||||
| WBVar01717648 | |||||||||
| WBVar01717649 | |||||||||
| WBVar01717650 | |||||||||
| WBVar01717651 | |||||||||
| WBVar01717652 | |||||||||
| WBVar01717653 | |||||||||
| WBVar01717654 | |||||||||
| WBVar01717655 | |||||||||
| WBVar01717656 | |||||||||
| WBVar01717657 | |||||||||
| WBVar01717658 | |||||||||
| WBVar01717659 | |||||||||
| WBVar01717660 | |||||||||
| WBVar01717661 | |||||||||
| WBVar01717662 | |||||||||
| WBVar01717663 | |||||||||
| WBVar01717664 | |||||||||
| WBVar01717665 | |||||||||
| WBVar01717666 | |||||||||
| WBVar02122773 | |||||||||
| WBVar01683710 | |||||||||
| WBVar01683711 | |||||||||
| WBVar02079707 | |||||||||
| WBVar01683712 | |||||||||
| WBVar01683713 | |||||||||
| WBVar02079709 | |||||||||
| WBVar01683714 | |||||||||
| WBVar02121124 | |||||||||
| WBVar01683715 | |||||||||
| WBVar02079710 | |||||||||
| WBVar01683716 | |||||||||
| WBVar01683717 | |||||||||
| WBVar01683718 | |||||||||
| WBVar01683719 | |||||||||
| WBVar01683720 | |||||||||
| WBVar01683721 | |||||||||
| WBVar01683722 | |||||||||
| WBVar01683723 | |||||||||
| WBVar00708267 | |||||||||
| WBVar00708268 | |||||||||
| WBVar00708269 | |||||||||
| WBVar00708270 | |||||||||
| WBVar00091057 | |||||||||
| WBVar00708271 | |||||||||
| WBVar00708272 | |||||||||
| WBVar00708273 | |||||||||
| WBVar00708274 | |||||||||
| WBVar01823007 | |||||||||
| WBVar00708275 | |||||||||
| WBVar02122433 | |||||||||
| WBVar02120776 | |||||||||
| WBVar00708276 | |||||||||
| WBVar00708277 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (85) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Heme; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16C4.4a | |||||||
| C16C4.4b | |||||||||
| Corresponding_CDS_history (2) | |||||||||
| Corresponding_transcript | C16C4.4a.1 | ||||||||
| C16C4.4b.1 | |||||||||
| Associated_feature | WBsf220890 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00010842 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103193 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040705 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028959 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1144747 | ||||||||
| Expr2031626 | |||||||||
| Drives_construct | WBCnstr00028536 | ||||||||
| Construct_product | WBCnstr00028536 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (214) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | II | Position | -14.2723 | Error | 0.002649 | |||
| Positive | Positive_clone | C16C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00062345 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
