WormBase Tree Display for Gene: WBGene00015099
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| WBGene00015099 | SMap | S_parent | Sequence | B0280 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ggtb-1 | |||||||
| Sequence_name | B0280.1 | ||||||||
| Molecular_name | B0280.1a | ||||||||
| B0280.1a.1 | |||||||||
| CE24762 | |||||||||
| B0280.1b | |||||||||
| CE00735 | |||||||||
| B0280.1b.1 | |||||||||
| B0280.1b.2 | |||||||||
| Other_name | CELE_B0280.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ggtb-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Jan 2009 13:54:58 | WBPerson2970 | Name_change | CGC_name | ggtb-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ggtb | ||||||||
| Allele | WBVar01500260 | ||||||||
| WBVar00837603 | |||||||||
| WBVar00837604 | |||||||||
| WBVar00837605 | |||||||||
| WBVar00837606 | |||||||||
| WBVar00837607 | |||||||||
| WBVar00837608 | |||||||||
| WBVar00837609 | |||||||||
| WBVar00837610 | |||||||||
| WBVar00837611 | |||||||||
| WBVar00837612 | |||||||||
| WBVar01645345 | |||||||||
| WBVar01645346 | |||||||||
| WBVar01903866 | |||||||||
| WBVar01837749 | |||||||||
| WBVar02122125 | |||||||||
| WBVar01837750 | |||||||||
| WBVar01837751 | |||||||||
| WBVar02141140 | |||||||||
| WBVar02124349 | |||||||||
| WBVar02141151 | |||||||||
| WBVar01499774 | |||||||||
| WBVar02125564 | |||||||||
| WBVar00401139 | |||||||||
| WBVar00401140 | |||||||||
| WBVar00401141 | |||||||||
| WBVar00401142 | |||||||||
| WBVar00401143 | |||||||||
| WBVar00401144 | |||||||||
| WBVar01722803 | |||||||||
| WBVar02141174 | |||||||||
| WBVar00059355 | |||||||||
| WBVar01939138 | |||||||||
| WBVar01265124 | |||||||||
| WBVar01265125 | |||||||||
| WBVar02124406 | |||||||||
| WBVar02125621 | |||||||||
| WBVar02150622 | |||||||||
| WBVar02121873 | |||||||||
| WBVar00063857 | |||||||||
| Strain | WBStrain00001303 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (36) | |||||||||
| Paralog (2) | |||||||||
| Structured_description | Automated_description | Predicted to enable small GTPase binding activity and zinc ion binding activity. Predicted to contribute to Rab geranylgeranyltransferase activity. Involved in PERK-mediated unfolded protein response. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Expressed in head; intestine; and tail. Is an ortholog of human RABGGTB (Rab geranylgeranyltransferase subunit beta). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0280.1a | |||||||
| B0280.1b | |||||||||
| Corresponding_CDS_history | B0280.1b:wp151 | ||||||||
| Corresponding_transcript | B0280.1a.1 | ||||||||
| B0280.1b.1 | |||||||||
| B0280.1b.2 | |||||||||
| Other_sequence (54) | |||||||||
| Associated_feature | WBsf645319 | ||||||||
| WBsf225199 | |||||||||
| Experimental_info | RNAi_result (25) | ||||||||
| Expr_pattern | Chronogram1088 | ||||||||
| Expr90 | |||||||||
| Expr5033 | |||||||||
| Expr1021670 | |||||||||
| Expr1036451 | |||||||||
| Expr1143036 | |||||||||
| Expr2012036 | |||||||||
| Expr2030272 | |||||||||
| Drives_construct | WBCnstr00002196 | ||||||||
| WBCnstr00029088 | |||||||||
| Construct_product | WBCnstr00029088 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (117) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Map | III | Position | -0.787736 | Error | 0.0003 | |||
| Positive | Positive_clone | B0280 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00018228 | ||||||||
| WBPaper00030935 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059604 | |||||||||
| WBPaper00064071 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
