WormBase Tree Display for Gene: WBGene00014218
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WBGene00014218 | SMap | S_parent | Sequence | ZK1098 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | prp-40 | Person_evidence | WBPerson11752 | |||||
Sequence_name | ZK1098.1 | ||||||||
Molecular_name | ZK1098.1a | ||||||||
ZK1098.1a.1 | |||||||||
CE03847 | |||||||||
ZK1098.1b | |||||||||
CE46142 | |||||||||
ZK1098.1c | |||||||||
CE00362 | |||||||||
ZK1098.1b.1 | |||||||||
ZK1098.1c.1 | |||||||||
Other_name | CELE_ZK1098.1 | Accession_evidence | NDB | BX284603 | |||||
Public_name | prp-40 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 11 Mar 2021 09:37:10 | WBPerson1983 | Name_change | CGC_name | prp-40 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | prp | ||||||||
Allele | WBVar01500260 | ||||||||
WBVar00405525 | |||||||||
WBVar00405526 | |||||||||
WBVar00405527 | |||||||||
WBVar00405528 | |||||||||
WBVar00405529 | |||||||||
WBVar00405530 | |||||||||
WBVar00598642 | |||||||||
WBVar01499774 | |||||||||
WBVar01447580 | |||||||||
WBVar02132520 | |||||||||
WBVar00850975 | |||||||||
WBVar00850976 | |||||||||
WBVar00850977 | |||||||||
WBVar00850978 | |||||||||
WBVar00850979 | |||||||||
WBVar00850980 | |||||||||
WBVar00850981 | |||||||||
WBVar00850982 | |||||||||
WBVar00850983 | |||||||||
WBVar00850984 | |||||||||
WBVar00850985 | |||||||||
WBVar00850986 | |||||||||
WBVar00850987 | |||||||||
WBVar00850988 | |||||||||
WBVar00850989 | |||||||||
WBVar00850990 | |||||||||
WBVar00850991 | |||||||||
WBVar00850992 | |||||||||
WBVar00850993 | |||||||||
WBVar00850994 | |||||||||
WBVar00850995 | |||||||||
WBVar00850996 | |||||||||
WBVar00850997 | |||||||||
WBVar00850998 | |||||||||
WBVar00850999 | |||||||||
Possibly_affected_by | WBVar02157269 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00043377 | ||||||||
00043378 | |||||||||
00043379 | |||||||||
00043380 | |||||||||
00043381 | |||||||||
00043382 | |||||||||
00043383 | |||||||||
00120933 | |||||||||
Contained_in_operon | CEOP3596 | ||||||||
Ortholog (48) | |||||||||
Structured_description | Concise_description | ZK1098.1 encodes a protein, with multiple WW/rsp5/WWP domains and FF domains, required for embryonic viability and for normally high rates of postembryonic growth. | Paper_evidence | WBPaper00005654 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Located in nucleus. Expressed in several structures, including body wall musculature; gonad; and nervous system. Is an ortholog of human PRPF40A (pre-mRNA processing factor 40 homolog A). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | ZK1098.1a | |||||||
ZK1098.1b | |||||||||
ZK1098.1c | |||||||||
Corresponding_transcript | ZK1098.1a.1 | ||||||||
ZK1098.1b.1 | |||||||||
ZK1098.1c.1 | |||||||||
Other_sequence (55) | |||||||||
Associated_feature (9) | |||||||||
Experimental_info | RNAi_result (21) | ||||||||
Expr_pattern | Expr9513 | ||||||||
Expr15830 | |||||||||
Expr1012317 | |||||||||
Expr1036371 | |||||||||
Expr1162531 | |||||||||
Expr2008705 | |||||||||
Expr2026939 | |||||||||
Drives_construct | WBCnstr00029218 | ||||||||
Construct_product | WBCnstr00014078 | ||||||||
WBCnstr00029218 | |||||||||
Microarray_results (23) | |||||||||
Expression_cluster (102) | |||||||||
Interaction (111) | |||||||||
Map_info | Positive | Positive_clone | ZK1098 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 0.577519 | |||||||
Reference | WBPaper00035598 | ||||||||
WBPaper00038444 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00061804 | |||||||||
WBPaper00063335 | |||||||||
WBPaper00065227 | |||||||||
Method | Gene |